Trichoderma reesei RUT C-30: M419DRAFT_114441
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Entry
M419DRAFT_114441 CDS
T06031
Name
(GenBank) hypothetical protein
KO
K14315
nucleoporin NDC1
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
M419DRAFT_114441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_114441
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
M419DRAFT_114441
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
NfeD_membrane
Motif
Other DBs
NCBI-ProteinID:
ETR98927
JGI:
TrireRUTC30_1_114441
UniProt:
A0A024S1J2
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MAGTPTRRAPYKDTLQPALHRRFSSTAGLLLAVSYLESILLSSWESYFWSWFPLGPAGFR
ALLLFSCGLTILILRIASYHVGIKTTGSGLYTLASLLLSARTYETALWYSVSSLLYCAIY
LGTRDEDANLHWITYYSGDRARLNERPVFFACYMFTFALVQTVEHYRHDVDRLDLGALER
KPVKEQKSTGIVSGSLQAVLEELPMALAECFKISLMAVPGAIVLYFLFLRSFAWSWGLTF
LRPFYNMPRTNMLPSSWPTDIYLLARCVVAGAGVGFLWTAGNKAFSLFMVKKPLKNGIPL
TSESKDPNGSLLNGLKSKKLSIQAFAMWELALIAQNDSARRQSIFNDIDRKGGPMWSQIY
SICLETLQSIESNVDAYGQPAAHEAPKPQPMEERHRSSAPLREDPIFTSQARQTPLQAGI
EKALERLARNPGSTPASELSPIARKTWQTAKDRVLSREQQEAVSPDHLKDQAQEFATRLL
SIGWIGSLIRQDFRTQFAAAVLGSPYAEPTLYANAATALCQLAVNSLAEDSYGNVHRDVP
TIIRTLTSIIKKVEALKEQFPLHWTDIKGAKDCPEVDELLVALKTGLEQVIVKFEPYSTD
LRLTRTDLRTAKEAYGKPEVEKPRARFLMTSQQEVAVETRTIEDWGLSKPARRGFRLPEM
EQVR
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtacaccgacgcggagagctccctataaggacactctgcagcctgctctgcac
cgacgcttctcctccacggccggcctgctgttggccgtgtcgtatctcgaatcgatcctg
ctgagcagctgggagtcttatttctggtcctggttcccgctaggccccgccggctttcga
gcactgctgctgttttcgtgcggcctcaccattctcattcttcggatcgcaagctatcac
gtgggcatcaagacgaccggctcgggactctatacgcttgcttctttgctgcttagcgcc
cggacgtacgagacggcgctctggtacagcgtttcgagcctgctttactgcgccatctat
cttggaacgagggatgaggacgcgaacctccactggatcacatactacagcggcgatcgc
gcccggctgaacgagcgacccgtcttcttcgcctgttacatgttcaccttcgccctggtg
cagaccgtggagcactacagacacgatgtggaccgtctggatcttggcgcgctggagagg
aagcccgtaaaggagcaaaagagcacgggaatcgtgtcgggatctctgcaagctgtgctg
gaagagcttcctatggctctagcagaatgcttcaagatatctctcatggctgtccccggg
gcgatagtcctgtactttctctttttgagatcgtttgcctggtcgtgggggttgacgttc
ctgcgccccttctacaacatgccccggaccaacatgctcccgtcgtcgtggcctacggac
atttacctcttggcacgttgtgtcgtggcaggagccggcgttgggttcctgtggacagcg
ggtaataaggctttctccctcttcatggttaagaagccgctgaagaatggcattcctttg
acatctgagtcgaaggatcctaatggcagtctgttgaacggcctaaagagcaagaagctc
tccattcaggcctttgccatgtgggagttggcccttattgcgcagaatgattcggcccgg
aggcaaagtatcttcaatgacatcgaccgcaagggggggcccatgtggtcccaaatctat
tccatctgcctggagactcttcagagcatcgagagcaatgtcgatgcctatgggcaaccg
gcggcgcacgaggctcctaaaccccaaccgatggaagagaggcatcgctcgtcagctccc
ctgagggaagatcccatcttcacgagccaagctaggcagactcccctgcaggcgggcatc
gaaaaggcgctcgagagactcgcacggaaccccggctcaacacccgcttcagagctcagc
cccattgctcgcaaaacttggcagacggcgaaagaccgggtgctgagcagggaacagcaa
gaggcggtctctccagaccatctgaaggaccaagcccaggagtttgctaccagactgctg
tcgatcggatggattggcagtctgatccgacaagacttccgcacgcagttcgccgccgct
gtcctgggaagcccgtatgctgagccgacattgtacgcgaacgcggccaccgcactctgc
cagctggcggttaacagcctggctgaagattcgtatggcaacgtgcaccgagatgtgccc
accatcatccggaccctgacatcaatcatcaagaaggtggaggccctgaaggaacagttt
cctctgcactggaccgacatcaagggagccaaggattgtcccgaggtggacgagctgctg
gtggccttgaagacgggactggagcaggtcattgtcaagtttgagccctacagcaccgat
cttaggcttacgcgcaccgacttgcggactgcaaaggaggcctatgggaaacccgaagtg
gagaagcccagggcgagattcttgatgacaagccagcaagaagtcgccgttgaaacgaga
accattgaagattggggattgtcgaagccggcacggagggggtttaggctgcccgagatg
gaacaggttcgatag
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