Trichoderma reesei RUT C-30: M419DRAFT_12026
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Entry
M419DRAFT_12026 CDS
T06031
Name
(GenBank) helicase associated domain-containing protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
M419DRAFT_12026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trr03041
]
M419DRAFT_12026
Enzymes [BR:
trr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
M419DRAFT_12026
Spliceosome [BR:
trr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
M419DRAFT_12026
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
WHD_HA2
HA2_C
DEAD
AAA_22
AAA_19
nSTAND3
T2SSE
nSTAND_NTPase5
AAA_30
Cas3-like_C_2
SRP54
ABC_tran
PhoH
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ETR98205
JGI:
TrireRUTC30_1_12026
UniProt:
A0A024S181
LinkDB
All DBs
Position
Unknown
AA seq
851 aa
AA seq
DB search
MSSKKYAFVPMDDGDSSDRHKESRMRSRQEYLKKREAERLALLRRQVAEETEELRSGVRL
SEREKAEFAKNRELLRLAEERLRIDDHQDGYVMPEDYITEKGKLDQKKKEEALYKRHVER
DEYGQEKFVTEHDEWEREQTTKAKAQIQGRERENDNYDYVLDDAQYIQWSLDSRMPGERK
TLTKEQQFLEAQIEAAEKKALSIQETRKSLPIYQYREQFLQALEQYQILVIVGETGSGKT
TQLPQYLHEAGYTKNGMKVGCTQPRRVAAMSVAARVADEVGVKLGHEVGYSIRFEDCSSE
KTILKYMTDGMLLREFMTEPDLAGYSAIMIDEAHERTVHTDILLALVKDLARERKDLKLL
ISSATMNAEKFAQYFDDAPIFNIPGRRYPVDIYYTPAPEANYLAAAITTVFQIHTTQGKG
DILIFLTGQDEIEAAEMEIAETAKKLGNRIKELVICPIYANLPSELQAKIFEPTPEGARK
VVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRASANQRSGRAGRV
GPGKCFRLYTKFAYMNEMEESPLPEIQRTNLNGVVLQLKSLGINELLDFEFMDPPPTETL
IGALNQLFALQALNHKGELTKIGRQMAEFPTDPMLAKAVLAADKEGCVEEVLSIVSMLGE
ASALFFRPKDKKIHADSARNRFTVKEGGDHITLLNIWNQWVDSGFSPIWAKENFLQQRSL
TRARDVRDQLAKLCERVEVAPSTCGANNLRPIKRAITAGFFPNAARLQKSGDSYRTFKNN
TTVWIHPSSVLMSVDPPEKTVIYYELVQTTKEYMRSVMPIEAAWLAELAPHFHKKKDIEA
LEDRKMPKKGR
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgagctccaaaaagtacgcctttgtcccgatggacgacggcgactcgtcggatcgccac
aaggagagccgcatgaggtcgcgccaggagtatctcaagaagcgcgaggctgagcggctg
gccctgctgaggcggcaggtcgccgaggagacggaggagctcaggagcggcgtgcggctg
tcggagcgcgaaaaggcagagtttgctaagaacagagagctgctgcgcctggccgaggag
cggctgaggatcgacgaccaccaggatggctacgtgatgcccgaggactacatcaccgaa
aagggcaagctggaccagaagaagaaggaggaggcgctgtacaagcgccacgtcgagcgg
gacgagtacggccaggagaagtttgtcaccgagcacgacgagtgggagcgggagcagacc
accaaggccaaggcgcagatccagggccgggaacgagaaaacgacaactacgactacgtg
ctggacgacgctcagtacatccagtggagcctggactcgcgaatgccgggcgagcgcaag
acgctgaccaaggagcagcagtttctggaggctcagatcgaggcggcggagaagaaggcc
ctgtctatccaggagacgaggaagagcctgcccatctaccagtaccgggagcagttcctg
caggctctggagcagtatcagatcctcgtcatcgtgggtgagacgggcagtggcaagacg
acccagctgccccagtatctccacgaggccggatacaccaagaacggcatgaaggtcgga
tgcacgcagccacgaagggtagcggcaatgagtgtggcggcgcgtgttgccgacgaagtt
ggcgtcaagctcggccacgaggtcggctactcgatccgatttgaagactgctcgagcgag
aagacgatactcaagtacatgacggacggcatgttgctccgagagttcatgacggagcct
gatctggcggggtactcagccatcatgattgacgaggcccacgagcggacggtgcatacg
gacattctgttggccctggtcaaggatctggcacgagaacggaaagatctgaagctgctc
atatcctctgccaccatgaacgccgaaaagttcgcgcagtacttcgacgacgctcccatc
ttcaacatccctggtcgacggtaccccgtggacatttactacacgcccgcgccagaggcc
aactacctggctgccgccatcacaaccgtgttccagattcacaccacgcagggcaagggc
gacattcttatattcttgacaggacaggacgagatcgaagccgccgaaatggagattgca
gagactgcgaagaagcttgggaatcgaatcaaggaattggtcatctgccccatctacgcc
aacctgccgtcagaactccaggccaagatttttgagcccaccccagagggcgcccgcaaa
gtcgtgctggcgaccaacattgccgagacaagtctgacgattgacggcattgtctatgtc
atcgaccccggctacgtcaaggagaacgtctacaacccggcgactggcatgtcgaacctg
gtcgtcgtcccctgctctcgagcatccgccaaccagcgcagcggtcgtgccggacgtgtc
gggccgggcaaatgcttccggctctacaccaagtttgcctacatgaacgagatggaggag
tctccgctgcccgaaatccagcggacgaacctcaacggcgtggtgctgcagctcaagtcg
ctgggcatcaacgagctgttggactttgaattcatggatccgcccccgacggagacgctc
atcggcgccctgaaccagctctttgccctccaggctctcaaccacaagggtgagctgacc
aagattggccgccagatggccgaattccccaccgaccccatgctggcaaaggccgtgctg
gcagccgacaaggagggctgcgtcgaggaggtcctgtccatcgtctccatgctgggcgaa
gcgtccgcgctcttcttccggcccaaggacaagaagatccacgccgacagcgcccgcaac
cgcttcaccgtcaaggagggcggcgaccacatcacgctgctcaacatctggaaccagtgg
gtcgacagcggcttctcgcccatctgggccaaggagaacttcttgcagcagcggtccctg
acccgcgcccgagacgtgcgggaccagctggccaagctgtgcgagcgcgtcgaggtcgcc
ccctcgacgtgcggcgccaacaacctgcggcccatcaagcgcgccatcacggccggattc
tttcccaacgccgcccggctgcagaagagcggcgacagctaccgcacctttaagaacaac
acgacggtgtggatccatccgagcagcgtgctgatgtcggtcgacccgcccgagaagacg
gtgatttactacgagctggtgcagacgaccaaggagtacatgcgcagcgtgatgcccatc
gaggccgcatggctggcagagctggcgcctcactttcacaagaagaaggatatcgaagcg
ttggaggaccgcaagatgccgaagaaggggcgatga
DBGET
integrated database retrieval system
