KEGG   Trichoderma reesei RUT C-30: M419DRAFT_121781
Entry
M419DRAFT_121781  CDS       T06031                                 
Name
(GenBank) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
trr  Trichoderma reesei RUT C-30
Pathway
trr03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:trr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    M419DRAFT_121781
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:trr03021]
    M419DRAFT_121781
   03019 Messenger RNA biogenesis [BR:trr03019]
    M419DRAFT_121781
Transcription machinery [BR:trr03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     M419DRAFT_121781
Messenger RNA biogenesis [BR:trr03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     M419DRAFT_121781
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_4 zf-CCCH_2 zf-CCCH_9
Other DBs
NCBI-ProteinID: ETS06978
JGI: TrireRUTC30_1_121781
UniProt: A0A024SLP4
LinkDB
Position
Unknown
AA seq 213 aa
MATTTTHPKHVDAILNHSAQPYTFRFSPFLRQTYQVGLPADRPICKAFQAGSCPNGTRCA
ERHASEGRSSRGDGHGGQQQQQPTGGLNSLVCKHWLRGLCKKGEHCEFLHEYNLRKMPEC
NFFMRNGYCSNGEECLYLHVDPLSKLPPCPHYDMGFCPLGPICSKKHVRRKLCVFYLAGF
CPDGPECKVGAHPKWSKDLEKPVPKSAEKSEEE
NT seq 639 nt   +upstreamnt  +downstreamnt
atggccacgacaacgacgcaccccaagcacgtcgacgccatcctcaaccactccgcgcag
ccctacaccttccgcttctcgcccttcctgcggcagacgtaccaggtcggcctgccagcg
gaccggccgatatgcaaggccttccaggcaggcagctgccccaacgggacgcgatgcgcg
gagcggcacgcgtcagaaggccggtcgtcgcgcggtgatggccacggcggccagcagcag
cagcagccgacgggcgggctcaactcgctcgtgtgcaagcactggctgcgcgggctgtgc
aagaagggcgagcactgcgagttcctgcacgagtacaacctgcgcaagatgcccgagtgc
aacttcttcatgcgcaacgggtactgctccaacggcgaggagtgtctgtacctgcacgtt
gatccgctgtcgaagctgccgccgtgtccgcactacgacatgggcttctgtccgctgggg
ccgatttgctccaagaagcacgtccggaggaagctgtgcgttttctatctcgcgggcttt
tgtcccgatgggcccgagtgcaaggtcggcgcgcatccgaagtggtccaaggatttggag
aagccggtgcccaagagcgcggagaagagcgaggaggag

DBGET integrated database retrieval system