Trichoderma reesei RUT C-30: M419DRAFT_125686
Help
Entry
M419DRAFT_125686 CDS
T06031
Name
(GenBank) NTF2-like protein
KO
K14284
nuclear RNA export factor
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03008
Ribosome biogenesis in eukaryotes
trr03013
Nucleocytoplasmic transport
trr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
M419DRAFT_125686
03015 mRNA surveillance pathway
M419DRAFT_125686
03008 Ribosome biogenesis in eukaryotes
M419DRAFT_125686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_125686
03009 Ribosome biogenesis [BR:
trr03009
]
M419DRAFT_125686
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
M419DRAFT_125686
mRNA cycle factors
Stress granule specific factors
M419DRAFT_125686
Ribosome biogenesis [BR:
trr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
M419DRAFT_125686
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
LRR_4
RRM_9
LRR_8
LRR_9
UBA_8
Motif
Other DBs
NCBI-ProteinID:
ETS06251
JGI:
TrireRUTC30_1_125686
UniProt:
A0A024SMN0
LinkDB
All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MAPRGKATSTREARNPLGAKSSSRGGIQKRRGPTRVDTDGDLDMDGPSKRPNRGPANEAA
GSRGRPSGRGPAPSRGAAKVAQIVMKQLGNGSSDLASRVSRPTRGRGGYTEGLTWLRVRG
LKQSKAASNADGGLSDLLSFMERKASSLQSGRKRQVTIRKSHKAGEYVFVGANKEDAEEL
VKLNTFTFAGIQLEVVESDADFEPPNKATESPETAELRAKLQAILSQRYNGESKLLKLDA
LATDAELVTLGMFETRERALKTFKGLMAICDGLFKTLQEKKDAIESISLANNSIDNVIQV
ESVATTFPQLKNLDMSGNLISNMEGLQRWKGKFKELDAIYMTGNPIEGTDPNYTATFLEW
FPKLRSINGIELRTAQQIAEQEAARLPKPIPQSGPDFRDVNGIGEQFLLEFFTAYDTNRE
ALISRLYDASSQFSLAVDAQSVRDPNGPPPLPWGAYIKSSRNLLKINTHHARSQRLFKGA
PAINDLWKELPMTKHPNMKDELSKYIMDCHPLPGLADPTGQSQFGVDGLILAVHGEFEEY
DPKSGTTGKRSFSRTFVLAPGLSGTAQIRVVSDMLSLRAYSALPNVFVAPSPAPADTASQ
HQAMVAELSKQTGMVPQYSEMCLSQVEWDFARALVIFNEKKAELPPEAFVSAP
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggctccacgcgggaaggccacatcgactcgagaggcccgcaatccccttggcgcaaaa
tccagctctaggggcggcattcaaaagcgaagaggtccgacgagagtcgacaccgatgga
gacctcgatatggacggcccttccaagcgaccaaacagaggccctgcgaatgaagcagcg
ggcagcagaggcaggccctcaggcagaggtcccgcgccatcgagaggtgctgccaaggtt
gctcaaatcgtcatgaagcagctgggcaatggtagctccgacttggcttcgcgagtatca
agaccaacaagaggcaggggcggctacaccgaagggctcacttggctaagggtccgtggg
ctcaaacaaagcaaggcggcgtctaacgcagacgggggtctctccgacctgctgagcttc
atggagaggaaagcctcgtctcttcaatccggacggaaacgacaggttacgattcgaaag
tcacacaaagctggagaatacgttttcgttggagcgaacaaggaggacgcggaggaacta
gtcaagctcaacacttttacattcgccggcattcagttggaagtggtggagtcggatgca
gattttgagccgccaaacaaggcgacagagtccccggagacggcagagctacgcgcgaag
ctgcaggcaatcctgagtcagcgctacaacggcgaaagcaaactgctcaagcttgatgct
ctagccaccgatgccgagctggtcacactcggcatgtttgaaacccgagagagggccctc
aaaaccttcaagggcctcatggcaatctgcgacggcctcttcaaaaccctccaagagaag
aaagatgcgattgagagcattagcctggccaataacagcatcgacaatgtcattcaggtt
gagtctgtggcaacaacattcccgcagctcaagaacctcgacatgagcggcaatctgatc
agcaacatggagggacttcaacgatggaagggcaagttcaaggagctcgatgccatctac
atgactggcaatccgattgaggggacagatcccaactacacggcgactttcctggagtgg
ttccccaagctacggagcatcaacgggattgagctccgcactgcgcagcaaatcgccgag
caggaagcggcccgtctgcccaagccgatcccacagagcggacccgactttcgagacgtc
aacggcatcggcgagcaattcctgctcgagttcttcacggcatatgacaccaaccgcgag
gcactaatctccaggctgtacgacgccagcagtcagttctcccttgctgtagatgcccaa
tctgtgagggatccgaacgggccgccgccgctgccctggggcgcttacatcaagtcttct
cgcaacctactgaagatcaacacacaccacgccagatcacagcgccttttcaagggggcc
ccggctatcaacgacctgtggaaggaactccctatgacgaagcatcccaacatgaaggat
gagctgagcaagtacattatggactgccatccgctgccggggttggcagaccccaccggg
caaagccagtttggagtcgacggcttgattcttgctgttcacggcgagttcgaggaatac
gacccgaaatcgggcaccaccggcaagcgaagtttctctcgcacgtttgtgctcgcgccc
ggcctatccgggaccgctcagatcagggtcgtcagcgacatgctctctctgcgagcatac
agcgccctgccgaatgtgttcgttgcaccttcaccagcccccgcggatacggccagccag
catcaggctatggttgccgaactgtcaaagcaaacgggcatggtgccgcaatactcggag
atgtgcttgtcgcaagtcgaatgggactttgccagagccttggtcatcttcaatgagaag
aaggcagagctaccaccagaggcattcgtgtcggccccttag
DBGET
integrated database retrieval system
