Trichoderma reesei RUT C-30: M419DRAFT_127490
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Entry
M419DRAFT_127490 CDS
T06031
Name
(GenBank) hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M419DRAFT_127490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_127490
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
M419DRAFT_127490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ETS04361
JGI:
TrireRUTC30_1_127490
UniProt:
A0A024SHY1
LinkDB
All DBs
Position
Unknown
AA seq
248 aa
AA seq
DB search
MAPPAAELSHLPKADGSANFSFGGYTITAAVNGPVEAQRRDENPFEALVDVNVRPAAGVG
GTAERQLEAILQPALRHLIAIRNFPRCVVQVTLQVMEAPENAYVNSKVMQPRLNLGIIPS
LLHAAMLGLLTAAIPLNTVASATCLAVTNATAGSTIKVDPSPTEIDQATSVHVLGFTAGR
DLLLAESEGSFTAEEWDRVLQTAENVCCRGQETGNDAEMGGYGAESENVLHFMRSVLEAK
AAESLHWR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcctgcggctgagctgtcacatctgcccaaggccgacggctccgcaaacttc
tcctttggcggctacacaatcacagccgccgtcaatggaccagtagaggctcagcgccgg
gatgagaatccctttgaagcgctggtggatgtgaatgtgaggccggcggcgggcgttgga
ggaactgctgagcggcagctggaggccattctgcagcctgctctgcgacatctcatcgcc
atcaggaattttcccagatgcgtggtgcaggtcacgctccaggtcatggaagcgcccgaa
aacgcctatgtgaacagcaaggtgatgcagccccggctgaacctcggaatcatcccatcg
cttctgcacgccgcgatgctcggtcttcttactgccgccatccctttaaacacagtggcc
tcggcaacctgcctggctgttacgaatgccacagcgggtagcacaatcaaggtagacccg
tcaccgacggaaatcgaccaagcgacctctgttcacgtgctgggcttcacggctggccgg
gaccttctcctggccgagagcgagggctccttcacagcagaggagtgggacagggttctc
cagacggccgagaacgtgtgctgtcgcggccaggagactggaaacgacgcggaaatggga
ggctacggggcagagtccgagaatgtgctacatttcatgcgctccgtcctggaagctaag
gcagccgagagcctccactggaggtga
DBGET
integrated database retrieval system
