Trichoderma reesei RUT C-30: M419DRAFT_129943
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Entry
M419DRAFT_129943 CDS
T06031
Name
(GenBank) nucleoporin-interacting protein NIC96
KO
K14309
nuclear pore complex protein Nup93
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
M419DRAFT_129943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_129943
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
M419DRAFT_129943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Nucleoporin_FG
Motif
Other DBs
NCBI-ProteinID:
ETS02153
JGI:
TrireRUTC30_1_129943
UniProt:
A0A024SAP7
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MSLFGQTTSTSLFGQPAQQQQQQQQGTTTQTPSTGGGLFGGGGGLFGGGQQQQQKPGGLF
GQTQTQQSTPQTGGGLFGSAATTQPSSGGLFGQTTAQNQQTSTTGGLFGNQQNASQQQKP
SLFGASTLGGGTTAAKPSLFGATTTTPAPAQQSSATPFSSTLLGGGGGGGGGQTLATQNP
TNATTSAAQPAGAYFDSLFAKTIKAGVVNSNMEDLPSLELGLGDLRHRLRKLQSKQTERA
EGKAHYLLAASGVDPSTAAKDLGLLDLQGARTERPTHGFAPADVDVETYLSNLQTKTTLS
MIQDGLERSLRDFDNFLEDNVAMEWDAQRKRIYQHFGIKPRETSTTAGREAQGGFGRSRR
KSQANVPRDSRSSAFGSSTFQRSVIGAPSRIGAHQPEFSDVDRSADGAGKSRNEDQALRE
RQSKLAEKVRSLNSSRLLGRPYPLLAELAEVEQKSHEPHAPHVVEAYRAMIEIVGEDAEA
ETGLSSKTAKERQFAEMYLDENPNSQRSVDMRRRILSGANAFLEKQFLREVESLIAKHPH
EAKLGGLPDITSKIKAYIRLRSARKDLVPDNTELQQIHGEYVWAIVFYLLRSGHVNEAAK
YVNDNSNHFRGIDRTFSTYLNNYAASEDRRITNRKLLDRCTNEYIQRSRNAPENTIDPFR
MACYKVIGRIELNNRNLDGLNTDINDWIWLQFNLAREGDKALEMAGESYGLADLQASIRE
IGQKHFPKSPSDDNNGSCGMYFYLQILSGMFEDAIAYLYPFSYVDAVHFGLALEFYGLLR
PSDPMTASNDLRTHSIKGLPQINFGRMIGYYTRDFRAADVVSAVDYLTLICLNADLEGEA
GARHSGLCHEALRELVLETREFSKLIGDIRPDGRRILGVIEGRGPLIGLDGQDDFVNTVT
LQAASFADESGRTTDSVLLYHLAGEYDAVVAIVSRALSEAISLEIGEDPMRLMPVKPRAG
AGQEAEQGSSLSLAAIDDPVELAKTMMTMYERDAMFYRNIQDQNKVACRVLLEMSDIKSL
VEASQWAQCLDKIRGLDILPLEAGGDASTIRAYASKFSSLSQPVSINVPNLIMWTIISCV
RQREQLVNGQFSGNEGTRKMMVEQLKQMILDLTTYTSQLRYRFPPHLHEALARASAE
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttttcgggcagacgactagcacgtcgctctttggccagcctgcccagcaacaa
caacagcagcagcagggcaccaccacacagacgcccagcacgggaggcggactttttgga
ggcggcggaggccttttcggcggcggacaacagcagcagcagaagcctgggggcctcttt
ggacaaacgcagacccagcagagcacgcctcagactggcggtggtctgttcgggtctgcc
gcgacgacacagccgagctcgggcggtttgtttgggcagacgacggctcagaaccagcag
acttccacgaccggtggcctgtttgggaaccagcagaatgcctcacagcagcagaagcct
tcgctctttggcgcctcaaccctgggcggtggcaccacggctgcgaagccatcgctcttt
ggagccacgacgacgactcccgctccggctcagcagagcagcgccacgcctttctccagc
acccttctgggcggcggcggcggcggcggcggcggccagacgctggccactcaaaatccc
accaacgcgacgacctctgcagctcagcccgccggcgcctactttgacagcctctttgca
aagaccatcaaggccggcgtcgtaaactccaacatggaggatctcccgagtctggagctg
ggtctgggcgacttgcgccatcgactgaggaagctgcagtcgaagcagaccgagagggcc
gagggaaaggctcactacttgcttgccgcctcgggcgtggatcccagcactgcagccaag
gatctcggcttgctcgacctccagggcgcgcgaaccgaacgaccaacacacggcttcgcc
ccggctgatgtcgacgtcgaaacatatctgtcgaacctgcagacgaagacgaccctgagc
atgatccaagacggcctcgagcggtcactccgcgattttgacaacttcctggaagacaat
gtggcgatggaatgggacgcgcagcggaagcgcatctatcagcactttggcatcaagcct
cgcgagacgtcgaccacagcgggtcgggaggctcagggcggatttggacggtcgcggcga
aagtcgcaagcaaacgtcccccgtgactctcgcagcagcgcattcggcagttcgactttc
caacgctccgttattggagccccgtccagaatcggagctcatcagccagagttttccgat
gtcgaccggtctgcggacggcgctggcaagtctaggaacgaggaccaggcccttcgcgaa
cgccagtctaagctcgctgagaaggtccgcagcctcaactcttcgcgtctgcttggtcgg
ccgtatcccctgttggcagagctggccgaggttgagcagaaatctcacgagccccacgcg
cctcacgtcgtggaggcttaccgggccatgattgagattgttggtgaggatgccgaagcc
gagacgggcctcagcagcaaaacggccaaggaacgccagtttgccgagatgtacttggac
gagaatcccaattcccagcgttcagtcgacatgaggaggcgcatcctaagcggcgccaac
gccttcctcgagaagcagttccttcgcgaggtggaatccctcattgccaagcaccctcac
gaggccaaacttggcggtctgcccgacattaccagcaaaatcaaggcatatatccgtctc
cggtcggctcgaaaggacctggtcccggataacacggagcttcagcagattcacggcgag
tacgtgtgggctatcgtcttctacctcctccgatccggccacgtgaacgaggcggccaag
tacgtcaatgacaacagcaatcacttccgaggcatcgaccgcacattttctacgtacctc
aacaattacgcagccagcgaggatcgtagaatcactaacaggaagctgcttgatcgctgc
acgaacgaatacatccagcggtcccgcaacgcgccggagaacacaatcgatcccttccgc
atggcctgctacaaggtcattggtcgaatcgagctcaacaaccgcaatctggacggcctc
aacacggatatcaacgactggatctggcttcagttcaacttggcccgagagggcgacaag
gcgctggagatggctggagaatcgtacggactggcggatctacaggccagcatcagggag
attggccagaagcatttccccaagtctccgtctgacgataacaacggcagctgcggcatg
tacttttacctccagatcctgtcgggcatgttcgaggacgccatcgcctacctctacccc
ttttcgtacgtggacgcggtgcactttggcttggctctcgagttttacggtctgctgcgt
cccagcgacccaatgactgcctccaacgacttgcgcacacacagcatcaagggccttccg
cagatcaactttggtcgcatgattgggtactacacccgcgacttccgggccgcggatgtt
gtctctgccgttgattacctcacgctgatctgcctcaacgctgatctcgagggagaagcc
ggggctcgtcacagcggcctctgccacgaggcattgcgggagctggtgctggagacgcga
gaattcagcaagctcattggcgatattagaccggatggccgccgcatcttgggcgtcatc
gagggtcgcggtccgctgattggccttgatggccaggatgactttgtcaacaccgtcacc
ctgcaggccgccagctttgccgatgagagcggtcggactactgactcggtgctgctgtat
cacctcgctggcgaatatgatgcggttgtggccattgttagccgtgctctcagcgaggcc
atctctctggagattggggaagacccaatgcgcctgatgcccgttaagccaagggctggc
gctggccaggaggcggagcaaggtagcagcctgagcctggcagccattgacgaccccgtc
gagttagccaagacgatgatgaccatgtatgagcgggacgccatgttctacaggaatatc
caggaccagaacaaggttgcatgccgcgtcctgctcgagatgagtgatattaagagcttg
gtggaggccagccaatgggctcaatgcctcgacaaaatccgcggcttggacattctgccc
ctcgaagcaggcggcgatgccagcacaatccgtgcctatgcctcgaaattctccagcctc
tcacaaccagtgtctattaatgtgcccaatctgatcatgtggaccatcatcagctgcgtc
aggcaacgagagcagctggtcaacgggcagtttagcggcaacgagggcacccggaagatg
atggtggagcagttgaagcagatgattcttgacctgacaacgtacacgagccagctgcga
tatcggttcccgccgcatctgcacgaggccttggcgagggcgtctgcggagtga
DBGET
integrated database retrieval system
