Trichoderma reesei RUT C-30: M419DRAFT_133317
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Entry
M419DRAFT_133317 CDS
T06031
Name
(GenBank) hypothetical protein
KO
K12879
THO complex subunit 2
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03013
Nucleocytoplasmic transport
trr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
M419DRAFT_133317
09122 Translation
03013 Nucleocytoplasmic transport
M419DRAFT_133317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_133317
03041 Spliceosome [BR:
trr03041
]
M419DRAFT_133317
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
M419DRAFT_133317
Spliceosome [BR:
trr03041
]
Complex C
Other components
EJC/TREX
M419DRAFT_133317
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
M419DRAFT_133317
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-ProteinID:
ETR98640
JGI:
TrireRUTC30_1_133317
LinkDB
All DBs
Position
Unknown
AA seq
2417 aa
AA seq
DB search
MPAKRKRLDRSSGEGGRPSPHNPGDAALALHERDDSMNQMNQGQGQGQGRGRGRGGHRGV
DRRNSSRVQNGSGPEPASRFAKAQLLLPADTAALSSTSRSAQPTSRSKYHYDNLTEEKIR
SWAERGREEIVRHGVQSREDVDITELSSLFQEFIYAVVENRLDATDAGTCVKEILGDETT
EVTKDFYVAPHTLLLDSLAIVMDNQPDLYRPALRNFLIATEVSPALMRQVLDAPILQQLG
LIRDTFARLGVRQATNLLYRQANYNLLREETEGYSKLVTEIFTTSSIPSPSPDLAEQTFE
RVKALIGTFDLDVGRVLDVTLDVAAAVLIKQFKFFVKFLRISSWWPRSHLILSSSAHAVG
GLPTWAQPDYPHWNTTAEDEEINAQHRLARDVAFWARAREVHLAAFFELGGREVSNLTAY
RPKLANGSNSSELPSDLDQQWIEITKTLPPPGNKVAAQLLGFKLLFYYSDLRDPTDVLPA
NLLYLAALLIKVGFISLADLYPHLSPPDEAMERVREEQMKVLEKEERASRGGPMNALLMA
GVLPQGDDDNPVSSNVPRRELPKKVEPEQKPATTEAAEDKKPLPEPMEQKVRLLDQLLTI
GAIPESLFILGKFPWIPETFPDILSRIHRILHVSMEKVFSESRPRPVGSAECPAKEIFSA
DQTGVAKGSVRLVRPPVKKIWRWPYPDKFDTNESQNYRFYWDEWADNIPVCQTVDDIFTL
CNTFLNISGVNIGKDETLLSKLASIGAKSLTEDTSESNYARWHDLLRRLLVPALSHTKAN
VAVVNAVWELLRRYPLTTRYSIYAEWFEGQISRLPAMRSAFARATAETRGTMKRLSLTNI
SEMAKQLAKTSYSSPGIVFRVAFEQLESYPNLIEGFVECAKYFTDLSYDVLVWSLMNSLG
KSRSRTQAEHALTTSKWLQALSRFSGKIFKRYSAINPIPVLQYVNDQLQRGNSTDLIILK
EFVNSMGGIVDSVDFNDAQILSMAGGERLRRQTLIRGQDKRFDSVRSSKRLIQALTDSKL
AARLLLNLAQYRQSAIYKVPEDEAHVKYLSALVDDSHQILVLYLDFIWSNLEPSAFDALV
PSINELISSYGLDTSIAFLIGRASLSHRLYPWGQKEAETAKENTQSTQQEATDKEGDVSM
SDEPKDKSGVAASTNDEQVGTDNPSTGPRAAADTKHKQKSDDATLTLAPLQPIVEVLKQT
VRPEVWQKINPELYAVFWALQLGDVFCPEEMYKEEKDRLESEGQAILRDRSDMSRRGQER
KNEKRQELLKQQLSLSMELKEHRQRKAKWMECLAEQVQSLCPDPKIKPDSLSDILLEQCF
LPRALLSPADAEYTYKFIIMLHESRAPNFKLMSLYDRLFNANRLRSLVFTSSVREAEYLG
RFLKLILRDLSRWHKNEPTEKGRPSKDQPRLGAYDKEGKGPSDRPYLGFAVSLKEDGAPD
TLMEHAQFKDLLFRWHKNLNTALKSCLAGTEWMHIRNALTVLKAVLDYFPAIDFMATQFT
AQLQKITKQEAASKTAAENEEGHRVDLSVAAQGAMSELQKRKSKWVMVQAFRPNAGGAPQ
SDADKSAASNLRATASDFQPQTTRPPTAEKEDGEVPDGKAQPTSAMSKDTLPVKPSGPKR
DVSMSRDDGPPRSSTPMGGQGSGPHGSRNDTRPHTLPDRPAHNLPTRPDVPIPSHFTPER
YPQSRGHDRRDARDGRDSHRVRDSRDPRESWESRDPREGKDHRDTRDPRETRAMEVDRPD
RSREYLDRRGNDMAPRDAGPTDLPPRPRQQEREWMPRDSWTNRPQDRLGDMPSQTPSAPP
GPADAPEPAMNPQRAALFAQDDGDRPRRGPEPDRGPRSRRPGPQDSMESINPERAALIDE
RDDAAHGRLREDVRERGGPRAQSPRRSGGRYGHEHGPPSGPYEDRHGHPFPQDVMRPTGR
TARERSPPGGESYRGSKGMERDGERAHMDKMRDASSSSGFHRSALGQEVEHRPPYQDQNY
GRLNPVPAATSTPDIPLGPRGRGRGTARNNPPGPLPAMPSRPDSRYGVSEASRPPSQERH
PPSGPASGRGRRGYEPGGNSTGPSAAPSGAPGGPHPDRMRNFGGGGGGGGAQENTPGGQG
QGSSTAASSGVHPDRLAQMGGPGSNAPPPPPPPPGPPPYGHGNGPVRHSMSSSGNDRPGP
RSSAGALPLEPAVPTGPASSGDRSSRSGGGRRQLAGINNMLQQAQAAMPNEGRPSGPRVN
PPRQMLGHSDAQVLAGGDMTPSVPDRSDAQWHESSARSGPPNGDDGPGRGEHDRSRRDRG
DGRNDRSKRSSRRSSRERERDGKEHSEHRDRRSMAGGVEGATREDRDARRSARDGGSRDA
PAAPSSGRESRHRGEGGMGARGGDERSGNRSNRGTTRDGAQRTEEQRREHRDDRGRKRRG
EEADGALSSDREKRARR
NT seq
7254 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgaagcgaaagcgacttgatcgatcttcaggcgaaggaggcagaccatcgccg
cataatccgggcgacgcagctcttgcgctccacgaacgagacgacagcatgaaccaaatg
aaccagggtcagggtcagggccaaggcagaggccgaggccggggaggccatcggggggtc
gatcggaggaactcgtcgcgtgtccagaacggctcagggccagagccagcctcccgcttc
gcgaaggcccagctcctcctcccagccgacaccgcagccctctccagcacctcgaggagc
gcccaacccacctccagatcgaagtatcactatgataatctcacagaggaaaagatccgg
tcatgggctgaacgagggcgtgaagagattgttcggcatggcgtgcagtcgcgagaagac
gtcgacatcacggaactgtccagcttgttccaggagtttatttatgcggttgttgagaac
aggctggatgccacagatgctggaacgtgtgtcaaggagattttgggggacgaaacgaca
gaggttactaaggatttctatgtcgctcctcacacgctactcctcgactcgctggctatt
gtcatggacaaccagcccgatttataccgcccggctcttcgcaacttcctcattgccacc
gaagtctctcccgcgctgatgcgacaagtgcttgatgcgcctatacttcagcagcttggc
ctcatcagagatacctttgctagacttggtgtcaggcaggcgacaaacctgttgtaccgt
caagcaaactacaaccttttacgagaggagacggagggatactcaaagctcgtcaccgaa
atcttcacaacgagcagcataccgtcaccgtcgccggatcttgcagaacagacgtttgag
agggtcaaggctctgattggaacattcgacctggacgtcgggcgagtcctcgacgtcact
ctcgatgttgctgctgccgttctcataaagcagttcaagttcttcgtcaagttcctgcga
atcagctcttggtggccgcgctcgcatcttatcctcagctcctcggcccatgccgtcggc
ggcttgccaacctgggctcagccggattatccacattggaacacgaccgcagaagacgag
gagatcaatgcacagcacagacttgctcgagacgttgccttctgggctcgagcacgggag
gtgcatctggcagcgttctttgaactcgggggcagggaggtatctaatctgacggcctat
cgaccgaagctcgccaacggcagcaactcgagcgaattaccttctgatcttgatcaacaa
tggatcgaaattaccaaaacccttccgccacccggcaacaaggttgctgcgcagcttctg
ggcttcaagctcctcttctactacagcgatctgcgggacccgaccgatgttctccccgcc
aatctgctctacttggcggctctcctcatcaaagtcggcttcatctccctcgccgacctc
taccctcacctttcacccccggatgaagcgatggagcgcgttcgcgaggagcagatgaag
gtcctagagaaggaagagagagcgtcccggggaggccctatgaatgcgctactcatggcc
ggcgttcttccccaaggcgacgacgataaccctgtgtcttccaacgtcccccgacgagaa
ctaccgaaaaaggtggaacccgagcagaagccagccaccacagaagcggccgaggacaag
aagcctctcccggagcccatggagcagaaagtgaggctcctcgaccagcttctcaccatt
ggcgccatcccagagtcgttgtttatccttgggaagttcccgtggattccagagacgttc
ccagacattctatcccgaattcaccgcatattacatgtctcgatggagaaggtattcagc
gaaagccgcccaaggcctgttggtagcgccgaatgtccagccaaggagatattttctgca
gaccaaacgggtgtcgccaaaggcagtgtccggctcgtcaggccgcccgtcaagaagata
tggcggtggccctatcctgacaagtttgacacgaacgaaagccagaattatcgattctac
tgggacgaatgggccgataacatccccgtctgtcaaaccgtggacgatatctttaccctc
tgcaacaccttcctcaacatctccggtgtcaatatcggcaaagacgaaactctgctttcc
aagctggccagtattggagcaaaaagcttgaccgaggatacatccgagtcgaactatgct
cgctggcatgaccttctacgcaggctcctcgtgccggcgcttagccacaccaaggccaat
gtggcagtggtcaacgcagtgtgggaattactccgtcgatatccgctgacaacacgatac
tcgatatacgcggagtggtttgagggacagatctctcggctgccggccatgcgatcggca
tttgctcgtgcaactgcagaaacgcgaggaacgatgaagcggttgtctctcaccaacatc
agcgagatggccaagcagctggccaagaccagttattcttctcctggtatcgtgttccga
gttgctttcgagcagctcgagtcgtacccgaacctgatcgaaggctttgtcgaatgcgcc
aaatacttcaccgacctctcctatgacgtcctggtctggtctctgatgaattccctgggc
aaatcccgaagccgcacacaggccgagcatgccctcacgacaagcaagtggcttcaggcc
ctctcgaggttctctggcaaaatcttcaaacgctactcggccatcaatcctattcccgtt
ctccaatacgttaatgaccaactccagcgcggcaattcaaccgatctgatcattctgaaa
gagttcgtcaattccatgggcggcatcgtcgactctgtcgacttcaacgacgcccagatc
ctatcaatggctggcggagaacgactgcgtcgtcaaacgctgatccgtggccaggataaa
cgctttgacagtgttaggagctcaaagcgactcatccaggccctcacggactcgaagctt
gccgcccggctgcttctcaacctcgcgcagtatcgccagtcagctatatacaaggtcccc
gaagacgaagctcacgtcaagtacttgtcggccctggtcgatgattcccatcagatactg
gtgttgtatctcgacttcatctggagcaatctggaaccttcggcattcgacgctttggtc
ccctccatcaacgagctgattagttcctacggattggacacaagcatcgctttcctgatt
ggacgcgccagcctgtctcaccgactgtatccttggggtcagaaggaggcagaaactgca
aaagagaacactcaatctacgcaacaggaggctactgacaaggagggagatgtatctatg
agcgatgagcccaaggataaatcgggtgtggctgcttctacaaacgatgagcaggtggga
actgataatccttcaactggcccgcgtgccgcagctgatacgaaacacaagcagaaatcg
gacgatgcgacgttgacgctcgcgcctctgcaacccattgtcgaggtgctcaaacagacc
gtgcggcccgaggtctggcaaaagatcaaccctgaactctatgctgtcttttgggccctg
cagctcggcgatgttttctgccccgaggaaatgtacaaggaagaaaaagaccgtctcgag
agcgaaggtcaagccatcctcagggatcgatcggacatgtctcgcagaggccaagagcga
aagaatgaaaagagacaggaactcttgaaacagcagctcagcctctcgatggagctcaag
gaacaccgccagcgaaaagcgaaatggatggagtgcttggccgagcaggtccaatcgctt
tgtcccgaccccaagatcaagcccgatagcctgtcagacattcttctggagcagtgcttc
ctccctagggcccttttatcgccagcagacgccgagtatacctacaagttcatcataatg
ctgcatgaatcgagagcgcccaatttcaagctcatgtccctctacgatcgactcttcaac
gccaaccggctgcggtctctcgtcttcaccagctccgtcagggaggccgagtacctcggc
cgattcctcaagctgatcctccgagacctgtccagatggcacaagaatgagccgactgaa
aagggcaggccaagcaaagaccagccacgtctgggcgcatacgacaaggaaggaaaggga
cctagtgaccggccatatctcggattcgctgtcagtctcaaggaggacggagcaccggat
actttgatggagcacgctcagttcaaagatctcctgttccgctggcataagaacttgaat
acagcgctcaagagttgcttggctgggacggagtggatgcacatcaggaacgcccttacc
gttctcaaggccgtcctggattacttccctgccattgatttcatggccacccagttcacc
gcacagcttcagaagattaccaagcaagaagctgcatccaagacagcagccgagaatgag
gagggccacagagtggacttgtctgtggccgcccagggagccatgtcggagttgcagaag
cgaaagtcgaaatgggttatggtccaggctttccgacccaatgcaggcggcgctcctcaa
tccgatgctgataaatcggctgcgtcgaatttgcgtgctacggcttctgatttccagcca
cagacaacgagaccccctacggctgagaaagaagatggagaagttccagatggaaaagcc
cagccaacctctgccatgtcaaaggacaccttacctgttaagccgtccggtcctaaacga
gacgtctccatgtctcgagatgatgggcctccacgctcatctactcccatgggcggtcaa
ggttcaggtcctcatggttcaagaaacgacactcgcccccacactctccccgacaggccc
gcacacaaccttcccacgcgacccgatgttcctataccgagccactttaccccagaacgt
tatccgcagagtcgaggacatgaccgtcgcgatgcgagagacggcagggatagtcacaga
gtgcgtgacagccgagatccacgagagtcttgggaaagtcgtgaccctagagagggcaaa
gaccaccgtgacacgagggatcctcgcgaaacccgagctatggaggtggacagacctgat
cgctctcgcgaatacctggaccgccgtggaaacgacatggcgccccgcgacgctggcccg
acagacctgccgcctcgcccgagacaacaggaaagagagtggatgccaagagactcctgg
acaaacagaccccaggaccgattgggcgacatgccctctcagacaccttcggctcctccc
ggccctgctgatgcacccgagccagccatgaacccccagagggcggcattgttcgcccag
gatgacggggaccgaccgcgacgaggcccggagccagatcgaggaccccgcagccgacga
cccgggccgcaggattcgatggaatcgatcaacccggagcgcgctgcattgattgacgaa
cgcgatgatgctgcgcatgggcggttgagagaagacgttcgagagagaggaggacctagg
gcgcagtctcctcggcgcagcggcggacgatatgggcacgagcatggacccccgtctgga
ccctacgaggatcggcacgggcaccccttcccgcaagatgtcatgcggcctaccggacga
actgcccgcgaacgttcaccacccggtggagagagctatcgcggcagcaagggcatggag
cgcgacggggagagagcccatatggacaagatgcgggatgcctcttcttcttcaggcttc
cacagatcagcgctcggacaggaggtagagcacaggcctccttatcaagatcaaaactac
ggacggctcaatccggtgccagccgctactagtactccggatattcctctcggtccccgt
gggcgaggccggggtacagcaaggaacaatccaccagggccgcttcccgcgatgccaagt
cggcccgacagtcgatatggagtttccgaggcgtctcgaccaccctcgcaagaaaggcac
cccccttcaggtcctgcatccggccgtggccgtcgtggctatgagcccggcggtaacagc
actgggccgtcggcagctccctctggagctccaggcggaccacatcccgataggatgagg
aactttggcggcggcggcggcggcggcggcgcacaggagaatacacctggtggccaaggc
caaggcagcagcacagcggcatcgtctggagtgcaccccgatcgacttgcgcaaatgggc
ggccccggatccaacgctccgccaccgcctcccccacctccaggacctccgccgtatggg
catggcaacggacccgtgcgtcactccatgtcttcctctggcaatgacaggccgggacct
aggtcgtccgccggcgctctcccgttggagcctgctgtgcctactggccctgcttcctct
ggcgacaggtcgtcaagatctggtggcgggagaagacagctggcaggcatcaataacatg
cttcagcaggctcaggcggccatgccgaatgaaggacgcccaagcggcccccgtgtcaac
cctccccgacagatgctcggccactcggacgctcaagttttggcgggaggagacatgacg
ccatccgtgcctgaccgctcagatgcacagtggcatgaatcatcagcccggagcggtccc
ccgaatggggatgacgggccagggcgtggagagcacgaccggagccgacgagatcgcggc
gatggccgaaacgaccgatccaagcggtcatcgcgccgaagcagccgcgaacgagagaga
gacggcaaggagcacagcgagcaccgtgatcgacgatccatggctggtggtgtagagggc
gcgacccgagaggatagggatgctcgcaggtcggcccgagatggcggatcgagagacgca
ccagcagcgccgagcagcggccgcgagtcgcggcacaggggcgagggcggaatgggagcc
aggggcggggacgagcgcagcggcaacaggagcaaccgagggacgacgagggacggagca
cagcgtacggaggagcagcggagggagcatagagatgaccgaggacgcaagaggagaggc
gaagaagccgacggagccttgtcaagcgatcgtgagaagcgagcacgacggtga
DBGET
integrated database retrieval system
