Trichoderma reesei RUT C-30: M419DRAFT_137503
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Entry
M419DRAFT_137503 CDS
T06031
Name
(GenBank) TFIIH basal transcription factor complex, subunit SSL1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03022
Basal transcription factors
trr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M419DRAFT_137503
09124 Replication and repair
03420 Nucleotide excision repair
M419DRAFT_137503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trr03021
]
M419DRAFT_137503
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_137503
Transcription machinery [BR:
trr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
M419DRAFT_137503
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
M419DRAFT_137503
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-ProteinID:
ETS01557
JGI:
TrireRUTC30_1_137503
UniProt:
A0A024SBJ3
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MADSDGEFVADDMSDDDIMDHTVTDGDPNAARPKGSKPAKRKRDRNGGSKAWEQSRRTWE
TDLPEESDGMLNLAGYEAERRRRLLRDTTPLQRGIIRHLVLVLDMSFAMAEKDLLPTRYR
LALSYAAAFVREYFEQNPISQLAIVGMRDGVALRVSDMGGNPAEHLERLREYEGQDPSGN
PSLQNALEMCRGALFHAPSHGTREVLIIYGALLSSDPGDIHDTINNLVAERIRVSVVGLS
AQVAICAELCSRTNVGDDSQYNVAMDETHFKELFLALTTPPVNRTKEQSTASLLMMGFPS
RTLAPGGTSSYCACHSQPCREGYLCTRCGVKVCRLPSECPACGLTLILSTHLARSYHHLF
PLRNWVEVPWAEAARSTACFSCQSPFPEPPKANKEKGKDEAAPAKAPAKGVSESGRYKCQ
VCDHHFCIDCDVFAHMVIHNCPGCQSQSQQAAAAAAPLTDGVEANGNGHTTNGGMMAIDG
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggccgactccgatggcgagttcgtcgccgacgacatgtccgacgacgacatcatggac
cacaccgtgacggacggcgacccgaacgcggcacgtcccaagggctccaagccggccaag
cggaaacgcgaccgcaacggcggctccaaggcatgggagcagtcgcggcgcacgtgggag
acggacctgcccgaggagagcgacgggatgctcaacctggcgggctacgaggcggagcgg
cggcggcggctgctgcgcgacacgacgccgctgcagaggggcatcatccggcacctggtg
ctggtgctggacatgtcgtttgccatggcggagaaggacctgctgccgacgcggtaccgg
ctggcgctgagctacgcggcggcgtttgtgcgcgagtactttgagcagaaccccatctcg
cagctggcgattgtgggcatgagggacggcgtggcgctgcgcgtgagcgacatggggggt
aatcccgcggagcacctcgagaggctgcgggagtacgaggggcaggatccgtcgggcaat
ccgagcttgcagaatgcgctcgagatgtgtcggggcgccttgtttcacgctccttcacat
ggcacacgagaggtactcatcatctacggcgccctgctgtcgagcgaccccggcgacatc
cacgacacaatcaacaatctcgtcgctgagcgaatacgggtgtcggtggttgggctgtcc
gcccaggtggctatttgcgcggagctgtgctctcggacaaacgtgggagacgactctcag
tacaatgtcgccatggacgagacgcacttcaaggagctcttcctggcgctgacgacgcct
ccggtgaatcggacaaaggagcagagcacggcaagtctcctgatgatggggtttccgtcg
cggacgcttgcccctggcgggacgtccagctattgtgcttgtcatagccagccttgtcgg
gagggctacctgtgcactcgttgcggtgtcaaggtgtgcaggctgccttcggagtgtccc
gcctgtggactgacgctcattctctccacacatctcgctcgctcatatcaccacctgttc
cccctgcgaaactgggtcgaagtgccctgggctgaagccgcacgatccacagcctgcttc
tcctgccaaagcccctttcccgagcctcccaaggcgaacaaggaaaagggcaaagacgag
gcggcgcccgcaaaagcaccggcaaagggcgtcagcgaaagcgggcggtacaagtgccag
gtgtgcgaccaccacttttgcatcgactgcgatgtctttgcgcacatggtgatacacaac
tgtcccgggtgtcagagccagtcgcagcaggctgctgctgccgcggcgccgttgactgat
ggggtggaggcgaatgggaatgggcatacgacgaatggtgggatgatggctatagatggg
tag
DBGET
integrated database retrieval system
