Trichoderma reesei RUT C-30: M419DRAFT_24193
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Entry
M419DRAFT_24193 CDS
T06031
Name
(GenBank) ATP-dependent RNA helicase DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
M419DRAFT_24193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trr03041
]
M419DRAFT_24193
03009 Ribosome biogenesis [BR:
trr03009
]
M419DRAFT_24193
Enzymes [BR:
trr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M419DRAFT_24193
Spliceosome [BR:
trr03041
]
Complex A
U1 snRNP components
U1 related factors
M419DRAFT_24193
Complex B
M419DRAFT_24193
Ribosome biogenesis [BR:
trr03009
]
Eukaryotic type
Pre-60S particles
Helicases
M419DRAFT_24193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Rod_N
Helicase_C_2
Glyoxalase_3
P-loop_SecA
Utp25_C
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ETS03798
JGI:
TrireRUTC30_1_24193
UniProt:
A0A024SFE5
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MSGYGGGRSNGGGYGGGGGYGRDRGGDRGGDRNGYGGGGYGGGRGGFGGNSYGGGYGGGG
GGGYGGGYGGGGGDRMGHLGAGLQKQDWDLSALPKFEKDFYKEHPDVTARSPAEVDEFRR
KHQMTIAGRDVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIA
ETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQQEISKFGRSSRIRN
TCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMGF
EPQIRKIIEQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQIVE
VVTEMEKRDRMIKHLEKVMENKENKILIFVGTKRIADEITRFLRQDGWPALSIHGDKQQN
ERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGQH
GTAITLFTTDNQKQARDLVNVLQEAKQQIDPRLAEMVRYGGGGGGRGYGGYRGRGGGRAN
NSNNLPLGNRRW
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctacggcggcggtcgatccaacggtggtggttacggaggcggcggtggttac
ggccgtgatcgtggtggtgatcgcggcggcgaccgcaacggttacggaggcggtggctac
ggcggaggtcgtggcggctttggcggcaacagctacggtggcggctacggcggcggtggt
ggtggtggttatggcggcggttatggaggcggcggtggtgaccgaatgggccacctcggc
gctggtctgcagaagcaggattgggacctgtccgcccttcccaagttcgagaaggacttc
tacaaagagcaccccgatgtcactgctcgctctcctgccgaggtcgatgagttccgtcgc
aagcaccagatgaccattgctggtcgtgacgtccccaagcccgtcgagacctttgacgag
gctggcttcccccgctatgtcatggacgaagtcaaggcccagggcttccctgcgcccacg
gccattcagtctcaaggatggcccatggctctctccggtcgcgacgtcgtcggtattgcc
gagacgggttccggaaagactctgacctactgtcttcccgccattgttcacatcaacgcc
cagcccctgctcgcccctggcgacggccccatcgtgctgattcttgcccccactcgtgag
ctggcagtccagattcagcaggaaatctccaagtttggccgctcatcccgcatccgcaac
acctgcgtctacggtggtgtgcccaagggcccccagatccgcgacctctcccgaggtgtc
gaggtctgcattgccacccccggacgtctcatcgacatgctcgaggccggcaagaccaac
ctgcgtcgtgtgacttacctggtcctcgacgaggctgatcgcatgctggatatgggtttc
gagccccagattcgcaagatcatcgagcagatccgacccgaccgacagactctcatgtgg
tccgccacctggcccaaggaagtccgtgcccttgcctccgacttcctgcaggacttcatc
caggtcaacattggctccatggagctggctgccaaccaccgaatcacccagattgtggag
gttgtcaccgagatggagaagcgcgatcgcatgatcaagcacctcgagaaggtcatggag
aacaaggagaacaagatcctcatctttgtcggaaccaagcgcattgccgacgagattacc
cgattccttcgccaggacggctggcccgctctctcaattcacggcgacaagcagcaaaac
gagcgagactgggtactggaccagttcaagaccggaaagagccctatcatggttgctacc
gacgtggcgtctcgtggtatcgatgttcgcaacatcacgcatgtcttgaactacgattac
cctaacaactcggaggattacatccaccgtattggccgtaccggccgtgctggccagcac
ggaaccgccattacgctgttcaccactgacaaccagaagcaggctcgtgatcttgtcaat
gtcctccaggaggccaagcagcagattgatcctcgcctggctgagatggttcgctatggt
ggtggcggcggtggtcgcggctacggtggttaccgtggccgtggcggcggcagagccaac
aactccaacaaccttccgctcggcaatcggcggtggtaa
DBGET
integrated database retrieval system
