Trichoderma reesei RUT C-30: M419DRAFT_25170
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Entry
M419DRAFT_25170 CDS
T06031
Name
(GenBank) putative meiotic recombination protein Ski8/Rec14
KO
K12601
superkiller protein 8
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M419DRAFT_25170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_25170
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
M419DRAFT_25170
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Ribosomal_L32p
NBCH_WD40
eIF2A
Nup160
WDR54
PALB2_WD40
Nucleoporin_N
DZR_2
Motif
Other DBs
NCBI-ProteinID:
ETS01525
JGI:
TrireRUTC30_1_25170
UniProt:
A0A024S853
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MAAMATAFLPRLSSPLAFSVSRWANFYTTQYTLKFLPSLSIAIPGVTINLPGLLGDIWES
VLRAVPKNKVSHSKKRSRQMAGKALKDVNHLCKCPGCGEVKRTHRLCQNCLEAHITDIFS
LAATPRTLISASGSSTLHVHDTTDPSFPLRQSIPNAHKLGCHHVCTSRNGLYAASAGFGG
EVKIWELNKETGDWNSGGEVTGPTVKPGEVWAIALSEDGGYLASTTNDGRINVWDVADQS
KAKIREYETGSAGSGSFGMCVDLSRDGKFTASGHQNGSVYVFNNDTGRILYSLSGLAKPV
RAVAISPAGSRVAAAGDAGIIAIYDTKHGEHVGNLTGHSSWITSLDWSDTGEYLLSGSMD
GKVKVWSIERGVCVATHSETDKALWAVRWLPKTGRSEMFCTAGANRSISFYREATGS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcagccatggccaccgctttcctcccccgactatcctcacctctcgccttctccgtc
tctcgctgggcgaacttctacactacacaatataccctcaagtttctgccgtcgctatca
atcgccatccccggcgtcacaatcaaccttcctggactgctgggcgacatctgggaatct
gtgctgcgggcggtgcccaagaacaaggtctcacattccaagaagcgatcaaggcagatg
gctggaaaggcgctcaaggatgtcaaccatttgtgcaaatgtcccggttgtggagaggtt
aagaggacgcataggctatgccagaactgcctggaagcccacatcacagacatattctca
ctggcagcaacgccaaggacactcatctcggccagcggctcttcgacgcttcacgtccac
gacaccactgatccctcgtttcccctgcggcagtccatccctaatgcccacaagctaggc
tgccaccatgtctgcacatcacgcaacggcctgtacgccgccagcgctggcttcggaggc
gaagtcaagatctgggagctgaacaaggagactggtgactggaacagcggcggtgaagtc
acgggtcccacagtcaagcctggtgaagtgtgggcgattgctctcagcgaggacggaggc
tacctggcgagcaccacaaacgacgggaggatcaatgtgtgggatgtcgcggaccagagc
aaagccaagattcgcgagtacgagacggggagcgccggctcgggcagctttggcatgtgc
gtggatctcagcagagacggaaagttcacggccagcggacaccagaacggctcagtctac
gtgttcaataacgacacgggaaggatactgtattccttgtccggccttgctaagcctgtc
cgggccgtggcaatatcgcctgccggcagcagggtggccgcagcgggcgatgctggcatc
atcgccatatacgatacaaagcacggcgagcacgtcggcaacctgactggccactcgtca
tggatcacttcactggactggagcgacacgggagaatatctgctgagcggctcgatggat
ggcaaggtgaaggtgtggtcgattgagcgcggcgtttgtgtcgcgacgcacagcgagacg
gacaaggcgctctgggccgttcggtggctgcccaagactggacgcagcgagatgttttgc
acagccggcgcaaacaggagcatttcattctacagggaggctacaggcagctga
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