Trichoderma reesei RUT C-30: M419DRAFT_26880
Help
Entry
M419DRAFT_26880 CDS
T06031
Name
(GenBank) hypothetical protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
M419DRAFT_26880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_26880
03036 Chromosome and associated proteins [BR:
trr03036
]
M419DRAFT_26880
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
M419DRAFT_26880
Chromosome and associated proteins [BR:
trr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
M419DRAFT_26880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Motif
Other DBs
NCBI-ProteinID:
ETR97220
JGI:
TrireRUTC30_1_26880
UniProt:
A0A024RYG7
LinkDB
All DBs
Position
Unknown
AA seq
1921 aa
AA seq
DB search
MSFGGFGGFGSNNQQQSTGGFGGFGANNNTTSSGFGSNTGGGFGTNTNTGGGMFGSNTNT
TGGFGSTAGGFGSNTGGFGSKPAFGSTATTTPASGGLFGASSTPSSTGGFGTANTGSSLF
GGGSNTTTTGTGFGNFGSTNTLGGGASGDPPGTAVTPFQAFTEKEPNSSTNQSNAFQNIL
FQDPYKKWSADELRLADYVQGRRHGNPSGAGAFGVSSGFGGGFGAANQTSTPATGGFGAT
NTTGGLFGSNTNTNTATSGFGGGFGANTAASNTGGGLFGNANKPSGGLFGNTTQQNQTGG
LFGSGTTNTATSGFGSTNTAGGGLFGSANTAASNTGGGLFGSNTQNKPAGTGFSFGNNPS
TTSTGFGGATTNAFGSGTNTTGGGLFGNANTSAQPSGGLFGNTAQQQQAPSGGLFGQAQT
QQSGGLFGNAQQKPATGGLFGSTPAATNTGGGLFGGTQQQGSTGLGGTNTNTGGLFGAKP
ATGGGLFGGTTAGQGNTGGTGLFGGAGTTAQTQQAGGTGLFGSAANQQKPGGLFGSTPAA
SGGGLFGNTATGTQGGIFGNAGGQQQQQGLGLGGSLLGASQQVSNAPQGLTANLNDVSAY
GSPSLFSGVSGGEVPNPGPLAVPLSGQPKPKRPSIFPMYKFTPAASGRFGTPQKRGFGFS
YSNYGTPGGASPAGLSGTPNTLGRSLLGGTGSGTSLTKSVSSNSLRRTVNVDDSILLPGA
FSNTNNTRWYGNSGSKKLVINRELRSDLFSTPQRDRQNGDNGTGPRKLSKRVSFDTNVDG
EDSPPVRAALPAPGDVPETPSDETPRSDKATPVSNGLRTPDMEQVKGKDKELAIVQEEET
GTPEPPANGFDNAPGKYWMEPTREEIQNMNRVQRQRVDNFTVGRENVGSITFKVPVDLSG
IDLDELCGGIIQLEPRSATVYPIAAKKPPVGKGLNVPARISLEQSWPRGGRDKRIANDPK
RFNKHIERLKRIVDTTFESYDPETGVWTFSVEHFTTYGLDDSDDETEFDTTLDLPAAAPL
SNIAPSAAFHAPASSQGDDVMVFSQSHMLPGAFDEEEGMFTTEQTGQQSFLGVSSADSAT
HDVKLSLENEMTGDDIAEYDMSEDEDMTRSSIGQHLAAEHDDASSEGGQDTKRLTATPGG
ILRARMRAIKDSAGPVKLEVADGDDWMEMLRKTVSPMKRDRYLLRELAESPYKQGGKTVS
FDLGDEADFRKSSIWGKSLTRSDRKDGAAMSAQIGMDQGHGFATSIDLMNSLFEKPKPKP
ARRELNASPSAKGLPKSPYERQAKVVTPEDNELAAPSRPTWGPDETLVLVRSLDGSHSRR
SIRDMTDILTFQRSSIQTDEQEIRLATFAAEPSKKYLQSQDVVTEIRLVEGVPQATLHVT
SLKSLYHHKSTNDAASIHEKQVWELASILFDDLDNLGSTDEEYLVRRNKLSQFWSDLVEQ
ASSTAVGLAATSEEKALACLAGHRIPEACKHLLDGKNFRLATLLPMIGTSEVAKREMREQ
IKSWLDSKMLSEFSEAIRTIYELLGGNVCVCEGLKGVPNEDRVDSFVISKKFGLDWKQSF
GLRLWYAISSHDDLSVAVDSFKDDIAQDKEDLPRPWYVEQGIAPLWDDANIDSRQDLLWG
LLQLYADADADLEAVLRPENSQLSPLEARLRWQLGLALTSTGKVSYGADGIEKADAATLA
YAAQLTRAGEWLEAAFVLLHLHHTAARKKALQEHLCQHADLIGFESDANFVTLTDKYRVP
AAWVWEALALYMRCVKKDAVAEVQCLLRAGSHVEAHRILVQHVAPQAIVERDYAGLSSLI
SQFQDRQQDIAEWTQGGEIYSHFLQLMESRSRGESATPALLDRLLAGLNAMKDAGVESNI
TRYAAISDMADETAREIVKLTRQKQDMELRSRILSLPLTQDRLLAYSVDLSLDRYREVMS
H
NT seq
5766 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcggcggatttgggggcttcggctccaacaaccagcagcagtcgacgggcgga
ttcggtggctttggggccaacaataacaccacctcgtcaggcttcggctccaacaccggc
ggaggcttcggcacgaataccaacaccggcggcggcatgtttggcagcaacaccaatacc
acgggcggctttggctcgacagccggcgggtttgggtccaacacgggcggctttggcagc
aagcctgccttcgggtcgacagctactactactcctgcttcaggtggtctcttcggagcc
tccagcacccctagcagcaccggcggtttcggaactgcgaacacgggctcgtctctcttt
ggcggcggctccaacaccaccactacgggcacgggctttggcaactttggatcgacaaat
accctggggggcggcgccagtggcgatcctcccggcacggctgtcactccgttccaggcc
ttcaccgagaaagagcccaacagcagcaccaatcagtcgaatgccttccagaacatcctg
ttccaagacccctataagaagtggtctgctgatgagctgagattggccgactacgtccag
gggaggcgacacggcaaccccagcggcgctggcgcgtttggagtgagctcaggtttcggc
ggcggctttggcgcagccaaccagacgagcacacctgcgactggtggttttggagcgaca
aacaccacaggtggactgttcggatccaacaccaacaccaacaccgcaacctctggattc
ggcggcggctttggtgcaaacaccgctgctagcaacactggtggtggcctctttggcaac
gccaacaagccaagcggaggactctttgggaacaccacccagcagaaccaaaccggtggt
ctgtttggaagcggcaccaccaataccgccacgtctggctttggctcgacaaacaccgct
ggtggtgggctctttggctcggcgaataccgctgcgtccaacaccggcggcggcttgttc
ggcagcaacactcagaacaaacccgcaggcactgggttcagcttcgggaacaacccaagc
acgacatcgacaggcttcggaggagccaccaccaacgctttcggctctggcaccaatacc
actggtggtgggctctttggcaacgccaacaccagcgcacagccaagtggaggtctcttt
gggaacaccgctcagcagcagcaggctccctcgggaggactgtttggccaggctcagacc
cagcaatctggaggattgtttggaaacgctcagcagaaaccagccacgggtggactcttc
ggctcgacgcccgctgccaccaacaccggcggcggcctcttcggcggcactcagcagcag
ggatcgacgggcctgggtggcacaaacaccaacaccggaggcctttttggagccaagcca
gctacgggtggcggcctctttggagggaccaccgctgggcaaggcaacactggcggaaca
ggcctcttcggaggtgctggcaccacagctcagactcaacaagctgggggtacaggcctt
tttgggtcagcagcgaaccagcagaagcccgggggcctctttggatcgaccccggcggct
tcaggtggaggactctttggtaacactgcaacgggaactcagggcggcattttcggcaac
gctggtggccagcagcagcagcaggggcttggcctcggtggctctctgctgggggcctct
cagcaagtgagcaacgcgccccagggactgactgcgaacctcaacgacgtctctgcctac
ggctcgccgtccctgttttctggagttagtggaggcgaggtcccgaatccaggtccgctc
gctgttcccctgagcggacagccgaagcccaagcggccgtcaatcttccccatgtacaag
ttcacccccgcggcgtcaggccgcttcggcactcctcagaagaggggctttggcttttcc
tacagcaactatgggactcctggaggagcaagccctgcaggactctctggcactcccaac
actctgggtcgtagcttgctcggcggcaccggcagcggaacctcccttaccaagagcgtg
tcttcgaacagcctgcgccgcactgtcaatgtcgacgacagcattcttctgcccggtgcc
ttttcaaacacgaataacacgcgctggtatggaaactcgggctcgaagaagctggttatt
aaccgcgaactgaggagcgacctcttctccacgccgcaaagggacaggcagaatggcgat
aatggaaccggcccgcgaaagctgtctaagcgggtcagcttcgataccaacgtggacggc
gaggactctcctcctgttcgggcggctctgccagcccctggagatgtgcccgagaccccc
agcgatgagactcctcgatccgacaaggcgacgcccgtttcgaacgggctccgaactccc
gacatggagcaagtcaagggcaaggataaggaattggccatcgtccaggaggaagagact
ggcactcccgagcccccggccaacggatttgacaatgcgcccgggaagtactggatggag
cccacgcgggaagaaatccagaacatgaatagagttcagcgccagcgggttgacaacttt
actgttggccgagagaacgtcggttccattaccttcaaggtcccggtcgacctcagtggc
attgatctggatgagctctgcggcggtatcatccagctggagcctcggtccgcgacggtc
tatcccattgcggcgaagaagccgcctgtcggcaagggtctcaatgtgcctgctagaatc
tcactggagcagtcctggcctcgtggtggccgagacaagaggatcgccaacgacccgaag
cgcttcaacaagcacattgagcggctcaagcgcattgtcgataccactttcgaaagctac
gatcccgagactggcgtctggaccttctcagtcgagcacttcacgacctacggactggac
gactctgacgacgagaccgagtttgacacgactctcgaccttcctgctgccgccccattg
tcgaacatcgcaccgtcggcagcattccacgcaccagcgtcgtcgcaaggtgacgatgtg
atggtgttctctcaatcgcacatgctgccgggggcgttcgacgaggaggaaggaatgttt
acgactgagcagactggacagcagtcttttttaggggttagctccgcggactctgccaca
catgatgtcaagctgtcgctggaaaacgagatgaccggcgacgacatcgcagagtatgat
atgtccgaggatgaagacatgacgaggtcttccatcggacagcatctcgccgcggagcat
gacgatgcctcgtccgagggtggccaggataccaagcggttgaccgcaactcctggtggc
atcctcagagccagaatgagagccatcaaggactcggctggccccgtcaaactggaagtc
gcagacggtgacgattggatggagatgttgaggaagacggtcagccccatgaagcgggac
cgctacctgctgagagagctggctgagtctccctataagcaggggggaaagacggtttcg
tttgatctcggcgatgaggcggactttcggaagtcgtccatctggggcaaaagcttgacc
cggtctgacaggaaagatggagctgcgatgagtgcccagattggtatggatcaaggccat
ggatttgccacgagtatcgacctgatgaactccttgtttgagaagccgaagccgaagccg
gcgcgccgggagttgaacgcttctccatctgccaaaggtcttcccaagtccccctacgaa
cgtcaggctaaggtcgtcacccccgaagataacgagctagcggctccgtcaaggccaact
tgggggccggacgagacccttgtcttggttcgatcgcttgacggctcacattcgcgtcgg
tctatacgcgacatgacggatatccttacgtttcagcgatccagtatacaaaccgatgaa
caggagattcgtcttgctacgttcgctgctgagccatccaagaagtatctgcaatcccag
gatgtcgtaaccgagattcgccttgttgaaggagtgccccaggccaccctgcatgtcaca
agcctcaagagcctgtaccatcacaagagtacgaacgacgcggccagcatccacgagaag
caggtctgggagcttgccagcatcttgttcgacgacctggacaaccttggctcgactgac
gaggagtatttggtgcgccggaacaagctgtctcagttctggtccgacttggtggaacag
gcttcatccacggccgtcggattggcggccaccagcgaagagaaggcgctcgcatgcctc
gctggtcaccggattcccgaggcctgtaagcatctcctggatggcaaaaacttccgcctt
gccactctgctccccatgatcggcactagcgaagtcgcgaagagggaaatgagagagcag
atcaagtcgtggctggactccaagatgctgtccgagttctccgaggctattcgtaccatt
tacgaattgttgggtggaaatgtgtgtgtgtgcgaaggtctgaagggcgtgcccaacgag
gatcgggtcgattcgtttgtcatctcgaagaagtttggtctggactggaaacaatcgttt
ggcttgcgattgtggtatgccatctcgagtcacgatgacttgtccgtcgctgtcgacagc
ttcaaggacgacatcgcccaggataaggaagacttacctcgcccttggtacgttgagcag
ggcatcgcccctctctgggacgacgccaacatcgactcccgccaggacctcctatggggt
ctgttgcagctgtatgccgacgccgacgccgatctggaggctgttctccgccccgagaac
tcgcagctgtctcctcttgaggcgagacttcgatggcagctgggccttgccctgacctcg
acgggcaaggtctcgtacggcgcagacggaatcgaaaaggccgatgcagctacccttgca
tatgccgcccagcttacccgagcaggagagtggcttgaggccgcctttgtgctgctgcac
ctgcaccacacggcggcacgcaagaaggctctccaggagcatctctgccagcacgccgac
ctgatcggattcgaatccgatgccaactttgtcacgctcacggacaagtatcgcgtcccg
gcagcgtgggtctgggaagcgctcgcgctttacatgcggtgtgtcaagaaagatgccgtg
gccgaagtgcagtgcctcttgcgagcgggatcgcacgtcgaggcccaccgcatcttggtc
cagcacgtggctcctcaggccatcgttgagcgtgactacgccggcctgtcctctctcatc
tcgcagttccaggaccgtcaacaagacattgcagaatggactcagggtggtgagatttac
agccacttcctccagctgatggagtcccgcagcagaggagaaagcgcaactcctgccctg
ctggacaggctcctcgctggcttgaacgcgatgaaggatgcgggagtggagagcaacatt
actcgatatgctgccatttccgacatggcggacgagactgcccgtgagattgtcaagttg
acacggcagaaacaggatatggaacttcgctccagaatcttgagccttcctcttacccaa
gatcggctgctcgcatactcggttgacctgagccttgaccgctacagagaggtcatgtcg
cattag
DBGET
integrated database retrieval system
