Trichoderma reesei RUT C-30: M419DRAFT_32507
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Entry
M419DRAFT_32507 CDS
T06031
Name
(GenBank) Rap30/74 interaction domain-containing protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M419DRAFT_32507
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trr03021
]
M419DRAFT_32507
Transcription machinery [BR:
trr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
M419DRAFT_32507
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
CDI
Motif
Other DBs
NCBI-ProteinID:
ETS05151
JGI:
TrireRUTC30_1_32507
UniProt:
A0A024SHB8
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MSDPAGNPGGPPHPPSHGPPRHPKPNPLRPLRKKPNPLVASSRKPPPKPSRPPANGAPSS
SAQGAANGAKPSAEEIRNQYGGWSEPPPNYPYNDIPIMTTKKALLDGIRYHLMKFSQTKL
GEKPIDPTDQEEFARPVTLHRRDARQPPPGRAVKVEEPERPPVDEQEAERLAQAKAEREA
QRAIDQAKIAPVAKEVVTKRPKKQKEEKTMFNRAPKTSAAKKESDLRYEEALPWHLEDAD
GKNVWVGSYVAALSESSVAFMIDGSVFRMIPLEKCYKFNSKPPFQPFTIDQAEAFMNRKV
DVGRWVMKDEEKKAGLSDLEATRRLLYGRGQMIKTESDTFRAASREEKMEHDELDVSGDE
FQDDDETPHFEPQEDEDTKESKTRIRREQLGANLFGEADEQEVDKELQEQLREELERQKY
GKTTKKALIKRDREEIYESDDSSSNPWSSSSEDDSSDEEEEAAKEEEKKEGESKDAQGDK
DKAKLQGAKGSTTPQGKQKLSEMAKKGKSLKRPGSPTLSESSGNESTRKKQKKVTAAALG
SRPGTPGLSQTTVRRPKITAGSGSDGEATAGEMSDGAMQKKKIKLVGSSRGTPSASRAGS
PNPAAAGASSPSSGGLIEPWEILEKIPADGITIGDLINLFQGRVGDGPGRMPRQEWIGLV
KQLCDYGPDKRLRRRK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccctgctggaaaccccggcggcccccctcaccctccttcgcatggccctccg
cggcacccaaagccgaatccgctgcgccctcttcgcaagaagccgaacccgctcgtcgca
tcgtctcgcaagcctccgcccaaacccagccgaccgcccgcgaatggcgcgccatcgtct
tcggcacagggtgccgcgaatggagcaaagcctagtgccgaagagatacggaaccagtac
ggtggctggagcgagccgccgcccaactacccttataacgacatcccgatcatgactacc
aagaaagcccttctcgacggaatacgctatcacctcatgaagttctcgcagaccaagctg
ggtgagaagcccattgatcccacagaccaggaggaattcgctagacccgttactctgcat
cggcgtgatgcccgccaacctcctccgggaagagccgtcaaggtggaggaacccgaacgg
cccccggtggacgagcaagaggcagaaagactggcgcaggcaaaggcagagagagaagcc
cagagagccatcgatcaagccaagattgcgcctgttgccaaagaagtagtcaccaagcgc
ccgaagaagcaaaaggaggagaagacaatgttcaatcgggccccgaaaacatccgcagca
aagaaggaatcagacctgagatatgaggaggctctgccatggcacctggaagacgcggat
gggaagaatgtctgggtcggcagctatgtggctgccctctccgaatctagcgttgctttc
atgattgatgggtcggttttccgcatgattccgctggagaaatgctacaagttcaactct
aagccgccattccaaccgtttactattgaccaggccgaggcattcatgaaccgcaaggtc
gatgtcggccgttgggtcatgaaggacgaggagaagaaggctggcctgagcgaccttgaa
gctacgcgtcggctgctgtacggacggggccagatgatcaaaaccgaaagcgacacattc
agagcagcctcccgcgaggagaagatggagcacgacgagctcgacgtctccggtgacgaa
ttccaggacgatgacgagactccccattttgagccgcaggaggacgaagacaccaaggaa
tccaagacgaggatccgccgcgaacagttgggagccaatctgtttggcgaagcagacgag
caagaagtggacaaggaactgcaagagcagcttagggaggagctggagagacagaaatat
ggcaagacgacgaaaaaggccctcattaagagagatcgagaagagatttacgaaagcgac
gactcgagttctaacccttggagcagctcgagcgaggatgatagctcggatgaggaggaa
gaagccgcgaaagaagaggagaagaaagaaggagaatccaaggatgcacagggtgacaag
gacaaggccaagctgcagggtgccaagggatcaaccaccccgcaaggcaagcagaagctc
tccgagatggcgaagaagggcaagtctctcaagcgccccggctcgcctaccctgtccgag
tcgagcggcaacgagtcgacgaggaagaagcagaagaaggttaccgcagcggctcttggt
agccggcccggcacccctgggctgtcgcagaccacagtccggcgtcctaagattacggcg
ggctctggaagtgacggagaagccacggcaggagagatgtcggacggggccatgcagaag
aagaagattaagctggttggcagctcgagaggaacgccttcggcatccagggctggcagt
cctaatcccgccgcggctggtgcttcttctccctcgtccggtgggcttattgagccatgg
gagattctggagaagataccagcggatggaatcacgattggtgacctcatcaacttattc
cagggtcgtgtgggagacggcccaggtcgtatgcccagacaagagtggattggactggtt
aagcaactttgcgattacggccctgacaagcggctgcgccggagaaagtga
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