Trichoderma reesei RUT C-30: M419DRAFT_33240
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Entry
M419DRAFT_33240 CDS
T06031
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
M419DRAFT_33240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trr03041
]
M419DRAFT_33240
Enzymes [BR:
trr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M419DRAFT_33240
Spliceosome [BR:
trr03041
]
Complex A
U2 snRNP components
U2 related factors
M419DRAFT_33240
Complex B
M419DRAFT_33240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
Motif
Other DBs
NCBI-ProteinID:
ETS04419
JGI:
TrireRUTC30_1_33240
UniProt:
A0A024SFU7
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MARPRDSRSPSPAGSHFNSRRHRKDDDRRDARDRRDDGRDARRRSRSRSPDYRYRDRDRG
RDVRDRGGRDRDSFRRRDRSLDRRDDDFYRGGPRDRRGPRSRERYPPRPRSPDRRRDRSR
DDYRRRDDSRNRGRREGTADSQARSSRADSRSRKTPLADSGRNGADEAQKAKTTAAQSEA
DKKAERLAKLEAWKRKKELEGQKQKEVNASQTRSLLAEMDKRAKEGSTALSSPVVSSAAS
PAPVESGSVSPAKPYTGKFDPKTIAKKSAVQRSNEPAKGALGSIDVQPPNISLPVKKGPT
GEIPPSTLSYLAIADNEHIASALPTNRAKASSFGFGKSHADGDKLPSKRKLDMDEEVITK
RQLTKLPSLPIETDDTPYADQDEDDESDGDNFAENEEEAAAAARAAHERRLQAENQTENQ
TEDQADNQAEDQAENAAEHQTENRTDEEMKDAESQVAKEANGEHVANGEETAKEAPADAM
DVDGEDEDIDPLDAFMDGLQQIEEVKNPVKTTSIAKKQQEPEAYFSDDDYAFNEQGDQEA
DAALLAIANKRKKKDIPTVDYSKLDLQPIRKNFWVEPAELSNLSEAEVADLRMELDGIKV
NGKDVPKPVQKWSQCGLTRQTLDVISSLGFDKPTPIQMQALPALMSGRDVVGVAKTGSGK
TMAFLLPMFRHIKDQEPLKDTDGPIGLIMTPTRELATQIHRDCKPFLKMMNLRAVCAYGG
APIREQIAELKRGAEIIVCTPGRMIDLLAANQGRVTNLRRVTYVVLDEADRMFDMGFEPQ
VMKIFANMRPDRQTILFSATMPRLIDSLTKKVLKSPIEITVGGRSVVAKEITQIVEVREE
NTKFLRVLELLGELYDKDEDARTLIFVERQEKADDLLKELMQKGYPCMSIHGGKDQVDRD
STISDFKKGVVPILIATSVAARGLDVKQLKLVINYDAPNHLEDYVHRAGRTGRAGNTGTA
VTFVTPEQENCAPGIAKALEQSDQPVPERLNEMRKSHREKVKSGKAKDSSGFGGKGLDRL
DQEREAARLRERKTHRAEGEEEEVKEEGAKKEEDDKKVDKTLSAIRAAASSIQARETTRA
DAGDSKAAQHAHGTGDKSKDPLDKVSSAVSAINSRLGKAGQLRSGQPIDNKGPDAGAYHA
TLEINDFPQKARWAVTNRTNVAKILEATGTSITTKGSFYPPGKEVPPGGEPKLYILIEGD
TELVVSAALNEMTRLLREGTIAAADADSRAPASGRYTVT
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggctcggccaagagactcgcgctcaccaagtcctgcaggcagccatttcaactcgcgc
cgccaccgcaaagatgacgaccggcgggatgccagagaccgccgcgacgatggaagggac
gctcgccgccgctcaaggtcgcgcagcccggattatcgataccgcgaccgtgaccgaggc
agagacgtgagagaccgtggtggccgtgaccgcgacagcttccgccgacgagaccgctcc
ctagaccgccgagacgatgacttttaccgtggaggcccccgtgaccgccgtggcccgaga
tcgagagagagatatccgcccagacctcgctcgcctgaccgacgccgcgaccgtagccga
gacgactaccggaggcgggacgattcgaggaacagaggccgacgcgagggtacggctgac
tctcaagctcgcagcagccgcgctgacagccgatcccgcaagacgccactggccgacagt
ggcagaaatggagctgacgaggcccaaaaggccaaaacgaccgcggcgcaatccgaggcc
gacaagaaggcagagcgactggcgaagctggaagcatggaagagaaagaaggagctcgaa
ggccagaaacaaaaggaggtgaacgctagccagaccagaagtcttcttgcggagatggac
aagagggccaaagaaggctcaacagccctctcgtctcctgttgtgtcgtctgcagcttcg
cctgcccctgtcgagtcgggcagcgtctctccagcaaagccttataccggcaagtttgat
ccgaaaacgattgcgaagaagtctgccgtccaaagatcgaatgagcccgccaaaggagct
ctcggatccatcgatgtccagccgccaaacatctctttgcctgttaagaagggacctact
ggtgagatccctccatccacgctttcctacctggccattgctgacaatgagcatatagct
tccgcactgccgacgaaccgtgccaaggccagcagtttcgggttcggcaaatctcatgcg
gacggcgacaagcttcctagcaagcgaaagctcgacatggacgaagaagttataaccaaa
cggcagcttaccaagctccccagtctcccgatagagacggacgacacgccttatgctgac
caagatgaggacgacgaatcggatggcgacaactttgccgaaaacgaagaagaggccgct
gcagccgctcgtgctgcgcatgagaggcgtcttcaagctgagaatcagactgaaaatcaa
actgaggaccaagccgacaaccaggctgaggaccaggcggaaaacgcagctgaacatcag
acggagaaccgcactgatgaggagatgaaagatgccgaatctcaagttgcgaaggaagcc
aacggtgagcatgtcgctaacggggaagaaacggccaaggaggctcctgcagatgccatg
gatgtcgacggagaggacgaggatatcgaccctctggacgcattcatggatggtcttcaa
cagatagaggaggtgaagaaccctgtcaagactacctctatcgcgaagaagcagcaggag
cccgaggcttacttctctgatgatgactatgctttcaacgagcagggcgatcaggaagca
gacgccgctttgcttgcaatcgccaacaagcgcaagaagaaggacattccaaccgtcgac
tattcaaagctagacttgcagcccattcgcaagaatttctgggttgagccagcagagttg
agcaacctttccgaagccgaggtcgcggacttgcgaatggagctggacggaatcaaggtc
aacggcaaggacgtccccaagcccgttcagaaatggtcccaatgtggcctcacccgccaa
acactcgatgtgataagttctctcgggtttgacaagcctacgccgattcagatgcaagct
ctccccgcgttgatgtctggccgagacgtcgtcggcgtggccaagacgggatctggcaag
accatggcattcttgctacccatgttccgtcacatcaaggaccaggagccgctcaaggat
acggatggccccatcggactgatcatgactccaacgcgtgagctggccacccagatccac
agagattgcaagccgttcttgaagatgatgaacctgcgagctgtttgcgcgtacggagga
gcccccatcagggaacagattgccgagctgaagcgtggtgccgagatcattgtttgcacc
cctggtcgcatgattgatctcctcgccgccaaccagggtcgggtcaccaacctcaggagg
gtcacctacgttgttctcgacgaagccgaccgcatgtttgacatgggcttcgagcctcag
gtgatgaaaatcttcgccaacatgcggcctgacaggcaaaccattctattctcggccact
atgccacggctcatcgactcgctcacgaagaaggtgctcaagagcccgattgagattacc
gtcggcggccgcagcgttgttgcaaaggagattacgcaaatcgtggaagtcagagaggag
aatacaaagtttctccgagttctggagttgctgggcgagctctacgataaggacgaagat
gctcggacgttgatcttcgtcgagcgacaagagaaggctgacgatctcctgaaagagctg
atgcagaagggctacccttgcatgtccattcatggaggcaaggaccaagtcgatcgcgac
tctaccatttcagacttcaagaagggcgtcgtgccgattctgattgcaacgtctgttgct
gctcgtggcttggatgtgaaacaactcaagctcgtcatcaactacgacgcacccaaccac
ttggaagactatgtccaccgagccgggcgaacggggcgcgccggaaacacaggaacagcc
gtcacctttgtcactccggaacaggagaactgtgctcctggcatcgccaaagccttggag
cagagcgatcagcctgttccggaacgactcaacgagatgcgcaaatctcatcgcgaaaag
gtcaagtcgggcaaggcaaaggattcctctggatttggtggcaagggcctcgaccgtctg
gatcaggaacgtgaagcggcccgccttcgtgagcgcaagacgcatagagccgagggtgaa
gaagaggaagtcaaggaggaaggcgccaagaaggaggaagacgacaagaaggtcgacaag
acactcagcgccatcagagctgcggcctcttccatccaagcccgcgaaactacgcgggcc
gatgcaggagacagcaaggcggctcagcacgctcacggtacaggtgacaagtccaaagat
cctctggacaaggtcagctctgctgtcagtgccatcaacagccgtctcggcaaggccggc
cagcttcgctccggccaacccatcgacaacaagggcccggatgccggcgcttaccacgcc
acgctggagatcaacgacttccctcagaaggccagatgggccgtcaccaaccgcaccaat
gtggccaagattctcgaggcgaccggaacatccatcaccaccaagggcagcttctatccc
cccggaaaggaagtaccgcctggaggagagcccaagctgtacattcttattgagggtgat
actgaacttgtggtgtcagctgccctgaatgagatgacaaggctcctgagagagggcacc
attgctgcggcggacgcggatagccgggctccagccagcggaagatataccgttacttag
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integrated database retrieval system
