KEGG   Trichoderma reesei RUT C-30: M419DRAFT_35019
Entry
M419DRAFT_35019   CDS       T06031                                 
Name
(GenBank) DNA-repair protein rad2
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
trr  Trichoderma reesei RUT C-30
Pathway
trr03030  DNA replication
trr03410  Base excision repair
trr03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:trr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M419DRAFT_35019
   03410 Base excision repair
    M419DRAFT_35019
   03450 Non-homologous end-joining
    M419DRAFT_35019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:trr03032]
    M419DRAFT_35019
   03400 DNA repair and recombination proteins [BR:trr03400]
    M419DRAFT_35019
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:trr04147]
    M419DRAFT_35019
DNA replication proteins [BR:trr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    M419DRAFT_35019
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     M419DRAFT_35019
DNA repair and recombination proteins [BR:trr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     M419DRAFT_35019
Exosome [BR:trr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   M419DRAFT_35019
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5 HHH_2
Other DBs
NCBI-ProteinID: ETS02478
JGI: TrireRUTC30_1_35019
LinkDB
Position
Unknown
AA seq 395 aa
MGIKQLFQIVKEEAPDAIKEGEIKNQFGRKVAIDASMSIYSFLIAVRSDGQQLMNDSGET
TSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRFQRKQEATEGLEEAKETGTA
EDVEKFSRRTVRVTREHNAECQRLLKLMGIPYIIAPTEAEAQCAVLARAGKVYAAASEDM
DTLCFNTPILLRHLTFSEQRKEPIQEIRLDKVLEGLNMEREQFVDLCILLGCDYLDPIPK
VGPTTALKLIREHGTLEKVVEAIEKDPKKKYTLPEDWPYKDARELFFHPDVRPADDPLCD
FKWDKPDIDGLVQFLVTEKGFSEDRVRSGGARLEKNLKNSQQARLEGFFKPVPKTEAEKV
AHKRKLEEKNEEKKKKLKQEKKEKAAAKAKPRGGA
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgggtatcaagcagctgtttcagattgtcaaggaggaggcgccggacgccatcaaggag
ggcgagatcaagaaccagtttgggcgcaaggttgccattgacgcctccatgagcatctac
agcttcctgatcgccgtgcgctccgacggccagcagctcatgaacgacagcggcgagacg
acgtcgcacctgatgggcatgttctaccgcacgctgcgcatggtggacaacggcatcaag
ccgctctacgtctttgacggcgcgccgcccaagctcaagtcgggcgagctggcgaagcgc
ttccagcgcaagcaggaggccaccgaggggctggaggaggcaaaggagacgggcacggcc
gaggacgtcgagaagttctcccggcggacggtccgggtcacgcgggagcacaacgccgag
tgccagcgcctgctcaagctcatgggcatcccgtacatcatcgcgccgaccgaggccgag
gcgcagtgcgcggtgctggcgagggccggcaaggtgtacgctgctgcgagcgaggacatg
gacacgctgtgcttcaacacgcccattctgctgcgccatcttacgtttagcgagcagcgc
aaggagccgatccaggagattcgactggacaaggtcctggaggggctgaatatggagcgt
gaacagtttgtcgacctctgcattctgctcggctgcgactatctcgaccctatccccaag
gtcgggcctacgactgcgctgaagctgatccgagaacacggcactctggaaaaggttgtc
gaggcgatcgagaaggaccccaagaagaagtacaccctgccggaggactggccttacaag
gacgcgcgggagctcttcttccacccagacgtgcgtccggcggacgacccgctctgcgac
ttcaaatgggacaagcccgacattgacggactggtgcagtttctcgtcaccgagaagggc
ttctccgaggaccgcgtccgcagcggaggcgcgcgactggagaagaatctgaagaactcg
cagcaggcgcgtctggagggcttcttcaagcccgtgcccaagacggaggcggaaaaggtt
gcgcacaagcgcaagctggaggagaagaacgaggagaagaagaagaagctcaagcaggag
aagaaggagaaggctgcggccaaggcgaagcctcgcggcggtgcatga

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