Trichoderma reesei RUT C-30: M419DRAFT_38412
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Entry
M419DRAFT_38412 CDS
T06031
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
M419DRAFT_38412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trr03041
]
M419DRAFT_38412
Enzymes [BR:
trr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
M419DRAFT_38412
Spliceosome [BR:
trr03041
]
Complex C
Other components
Step II factors
M419DRAFT_38412
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
WHD_HA2
AAA_22
DEAD
AAA_30
AAA_19
T2SSE
nSTAND3
nSTAND_NTPase5
AAA_16
ABC_tran
Cas3-like_C_2
PhoH
ALMT
TsaE
SRP54
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
ETR98693
JGI:
TrireRUTC30_1_38412
UniProt:
A0A024S009
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MDDLLNLELLSLVSKVTSELQNHVGISDKTLAEFLIAQRLESSSSDDFRKRLEALNADFP
PSLVDSLDRLVVAMHPKFKGQNGDAHHDEPHHHRTREENEKVFSGLALPDKKPAYDDGAD
AIDDTLALLEGLEGKAKKEKTSRKRSRSPEDGARESRSRRHRSRSRDGRRRDKYRSRSRS
QDAGDEDWRDGFREKKSRNRRRYDYNDDIDELSRAPAPEVDDEPIMNKVYQGHVTGIKDF
GAFVNIHHVKGKVDGLVHISRIVSGQRVNHPSDLLSPGQQVWVKVVSIEGRRVGLSMKDV
DQETGRDLEPQARLTTGANMEALGGRGRNGFVDDTPAMPRDSLGPPRRQKKRMTSPERWE
IRQLIASGVAKASDYPDLEEDYNATLRGEGELELEEDVDIEVREEEPPFLAGQTKQSLEL
SPIRVVKAPDGSMNRAAMAGTALSKERKELKQKEAEAAKEESKENLSAQWNDPMADPDKR
KFASDLKNARMNAKTEEEPEWKRAVIPKGQSLGKRTNLSIKEQRESLPVFAFRSQLIEAV
RENQILIVVGETGSGKTTQLTQYLAEAGFAEDGIIGCTQPRRVAAMSVAKRVAEEVGCKL
GEEVGYTVRFDDCTSPATRIKYMTDGMLQREILVDPDLTRYSCIMLDEAHERTISTDVLF
ALLKKALKRRPDLKVIVTSATLDADKFSAYFNECPIFTIPGRTYPVEILYSREPESDYLD
AALVTVMQIHLTEPKGDILLFLTGQEEIDTACEILYERMKALGPSVPDLLILPVYAQLPS
EMQSRIFEPAPPGSRKVVIATNIAETSITIDEIYYVVDPGFVKQNAYDPKLGMDSLVVTP
ISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPEIQRQNLSHTILMLKAMGIN
DLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLAKVLIAAVD
YGCSDEMLSIVAMLNLPNVFYRPKEKQSQADQKKSKFHDPHGDHLTLLNVYNAWKNSGYS
NPWCFENFIQARSMRRAKDVRDQLVKIMERYKHPVVSCGRDTQKVRQALCTGFFRNAARK
DPQEGYKTLTEGTPVYLHPSSALFGKQAEWIIYHTLVLTTKEYMHCTTSIEPKWLVEAAP
TFFKVAPTDRLSKRKQAERIQPLYNKYAGEDDWRLSAQRRGGRGGGGGTWG
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atggacgacctgttgaacctcgagctgctgtcgctcgtgtccaaggtcacctcggagctg
cagaaccacgtcggcatcagcgacaagaccctcgccgagttcctcatcgcccagcgcctc
gagagctcctccagcgatgacttccgcaagaggctcgaggcgctcaacgccgacttcccg
cctagcttggtcgacagcctggaccgcctcgtggtggccatgcatcccaagttcaagggc
caaaacggcgatgcgcaccacgacgagccgcaccatcacaggacgcgggaggagaacgaa
aaggtctttagtggactcgctctgcccgataagaagcctgcgtatgacgacggcgcagac
gccatcgatgatacgctggcgctgctagaggggctagagggcaaggcaaaaaaggagaag
acgtcaagaaagaggagtagaagtccggaagacggggccagagagtcaagatcacggcgg
catcgatcaaggtctcgagacggccggaggcgggacaagtacaggtcacgatcacggtca
caagatgccggcgacgaagactggcgggacggattccgagagaagaagtcgcgaaaccga
agacgatacgactacaatgacgacatcgacgagctcagccgggcgcccgcacccgaggtg
gacgacgagccgatcatgaacaaggtgtatcagggccatgtcaccggaatcaaggacttt
ggcgcctttgtgaacattcaccacgtcaagggcaaagtcgacggcctggtccacatatct
cgcatagtgtccggtcagcgtgtaaaccacccctccgatctgctgtctcctgggcagcag
gtctgggtcaaggttgtcagcatcgaaggccgcagggtagggctgtccatgaaggatgtc
gaccaggagacgggccgagatctcgaaccacaggcgagattgactactggcgctaacatg
gaagctcttggtggtcgtggaagaaacggatttgtcgatgatacacccgcgatgccccga
gattccctggggcccccgagacgacaaaagaagcgaatgacttcaccagaacgctgggag
atccggcaactcattgcgtccggtgtggccaaggcttcagactaccccgaccttgaggag
gattacaatgcgacgctccgtggagagggtgagttggagctggaggaagacgttgacatt
gaagttcgagaggaggagccgcccttcctggccggccagacaaagcagtccttggagctt
tctcctattcgagtggtcaaggctcctgatggatccatgaacagagcggccatggccgga
accgcgctgtctaaggagaggaaagaattgaagcagaaggaggccgaggccgccaaggag
gaatcaaaggaaaacctctccgcccaatggaacgatccgatggccgaccccgataagcgc
aagtttgctagcgatctcaagaacgctcgaatgaatgccaagacggaggaggagcccgaa
tggaagagggcagtcattcccaagggccagtcattgggcaagcgcaccaacctcagcatc
aaggagcaacgggagtctctgcccgtctttgcgttccgttcccagctgattgaggcggtg
cgtgagaatcagatcttgatcgtggttggagagactggctccggaaagacgacccagttg
acccagtatctcgccgaggccgggttcgctgaggacggcatcattggctgcacgcagcct
cgtcgagtcgccgccatgtcggttgcgaagcgtgtggcagaggaagttggctgcaagctc
ggcgaagaggttggatacaccgtccgtttcgacgactgcaccagccctgcgacgcggatc
aagtacatgacggacggtatgctgcaacgagagattcttgtggatccagacttgacgcgg
tattcctgcatcatgcttgacgaagcccacgagcgaaccatttctaccgacgtcttgttc
gccctgctgaagaaggcattgaagaggaggcccgacttgaaggtcattgtcacctcggcc
accctggatgccgacaaattctctgcttatttcaacgagtgtcccattttcacgatcccc
ggccgaacatatcccgtcgagatcctgtactctcgcgagcccgaatctgactacctcgac
gccgcgctcgtcacggtcatgcagatccacctgacagagcccaagggcgatattctactc
ttcttgaccggccaggaggaaatcgacacggcgtgcgagattctatacgagagaatgaag
gctcttggaccgagcgtgccagatctgctcatcttgcccgtgtacgcacagcttccgagc
gagatgcagagccgtatcttcgagcccgctcccccgggcagccgaaaggttgtcattgcc
acgaatattgccgaaacctccatcacgattgacgagatctactacgtcgttgaccctggc
tttgtcaagcagaacgcctacgatcccaagctcggcatggactctttggttgtcacgccc
atctcccaggcacaagccaaccagcgtgccggtcgtgccggtcgaacgggccctggaaag
tgtttccgcctgtacacagaggccgcttaccagtctgagatgctgccgacaacaatcccc
gagatccagagacaaaacttgtcgcacacgattctcatgctcaaggccatgggcatcaac
gacctcttgcactttgactttatggatccaccgccgatcaacacaatgttgacggccctg
gaggagctctacgccttgagcgcgttggacgacgagggcctgctgacccgcctgggacgc
aagatggcagacttcccgatggagccgtcgctggccaaggtgctgatcgctgccgttgac
tatggctgctccgacgagatgctcagcatcgtggcgatgctcaacctgcccaacgtcttt
taccgccccaaggagaagcagtcgcaggccgaccagaagaaatccaagttccacgaccct
cacggcgaccacctgacgcttctcaacgtgtacaatgcgtggaagaacagcgggtactcg
aacccgtggtgctttgagaactttatccaggcgcggtccatgcggcgggccaaggacgtg
cgggaccagctcgtcaagatcatggaacgctacaagcacccggtggtgtcgtgcggccgc
gacacgcaaaaggtgcggcaggctctctgcacgggcttcttccgcaacgcggcgcgcaag
gatccccaggaagggtacaagacgctgacggagggcacgccggtgtatctgcatcccagc
tcggcgctgtttgggaagcaggccgagtggatcatctaccacacgctggtgttgacgacg
aaggagtacatgcactgcacgacgagcatcgagcccaagtggctggtggaggcggcgccg
acctttttcaaggtcgcgccgacggataggctgagcaagaggaagcaggcggagaggatc
cagccgctgtataacaagtatgcgggcgaggatgactggaggttgagtgcgcagagaaga
ggagggaggggtggtggtggtggtacttggggttag
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integrated database retrieval system
