Trichoderma reesei RUT C-30: M419DRAFT_39765
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Entry
M419DRAFT_39765 CDS
T06031
Name
(GenBank) DNA repair helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03022
Basal transcription factors
trr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M419DRAFT_39765
09124 Replication and repair
03420 Nucleotide excision repair
M419DRAFT_39765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trr03021
]
M419DRAFT_39765
03036 Chromosome and associated proteins [BR:
trr03036
]
M419DRAFT_39765
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_39765
Enzymes [BR:
trr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
M419DRAFT_39765
Transcription machinery [BR:
trr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
M419DRAFT_39765
Chromosome and associated proteins [BR:
trr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
M419DRAFT_39765
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
M419DRAFT_39765
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
SNF2-rel_dom
AAA_11
nSTAND3
DUF5667
Motif
Other DBs
NCBI-ProteinID:
ETR96978
JGI:
TrireRUTC30_1_39765
UniProt:
A0A024RV89
LinkDB
All DBs
Position
Unknown
AA seq
765 aa
AA seq
DB search
MQTLDAGGHCVLEMPSGTGKTVSLLSLIVAYQQHMPEKRKLIYCSRTMSEIEKALVELQS
LMKYRTEQLGYEEEFRGLGLTSRKNLCLHPSVKREKSGSIVDARCRSLTAGFVKEKKDRG
ENVDVCVYHDNLDLLEPHNLIPNGVWSFDALLRYGEEHKQCPYFTARRMMEYCNVVIFSY
HYLLDPKIAERVSKDFSKDCIVVFDEAHNIDNVCIEALSTDITEDSIRKATRSAQHLERR
IAEMRETDQEQLQNEYEKLVQGLRAADESRQEDAFMANPALPDDLLKEAVPGNIRRAEHF
VAFLKRFLEYLKTRMKVRQVISETPPSFLAHLKEHTFIEKKPLRFCAERLTSLVRTLELT
NIEDYQALQEVATFATLVATYEKGFLLILEPYESDTAEVPNPTLHFTCLDAAIAIRPVFE
RFYSVIITSGTISPLEMYPKMLDFATVIQESYSMTLARKSFLPMIVTRGSDQASISSSFQ
VRNEPSVVRNYGSLLTEFAKITPDGMVVFFPSYLYMESIISMWQGMGILDEVWKYKLILV
ETPDAQETSLALETYRTACCNGRGAILLCVARGKVSEGIDFDHQYGRTVLCIGVPFQYTE
SRILKARLEFLRETYRIKENDFLSFDAMRHAAQCLGRVLRGKDDYGVMVLADRRFQKKRN
QLPKWINQGLSDADTNLSTDMAVSAARRFLKTMAQPFRSKDQEGISTWGYEDLLRHQKKM
EEERGEEPPPVLANARGQAHGSIAAGYESDYGDIDADMMELEGFE
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgctcgatgcgggcggtcactgcgtgctggagatgccgtcagggaccggcaag
acggtgtcactgctgtctctcattgttgcatatcagcagcacatgcccgagaagcggaag
ctcatctactgctcccgaaccatgtctgagattgaaaaggccctggtcgagctgcagtct
ctgatgaagtatcgcaccgagcagttggggtacgaagaggagtttcgcggccttggcctg
acaagtcgcaagaacttgtgtcttcacccctccgtcaagagggaaaagagtggctcgatt
gtcgacgctcgctgccggagtctaactgcagggtttgtcaaggagaagaaggaccgaggt
gaaaatgtcgatgtctgtgtctatcacgataaccttgatctgctcgaaccacacaacctg
atacccaacggcgtatggtcctttgatgcactgttacgatacggagaggagcataagcag
tgcccctatttcactgcgcgacgcatgatggaatactgcaatgtagtcatcttctcctat
cactacctcctagatcccaagattgcagagcgtgtctccaaagacttttccaaggactgc
attgtggtgtttgacgaagcccacaacatcgacaacgtctgcatcgaggcgctcagcacc
gacattaccgaagactcaatacgcaaagcgacccgcagcgctcagcatctcgagcggaga
atcgccgagatgcgggagacggatcaggagcagctccaaaacgaatacgagaagcttgtt
caggggcttcgcgcggcagatgagtcgaggcaggaggatgcctttatggccaatccagcc
ttgccggatgaccttttgaaagaggctgtgccgggcaacatcaggagagcagaacatttc
gtggcctttttgaagcgattcttggaatatctcaagacgcgaatgaaagttcggcaagtc
atctcggaaacaccaccgtcgtttctggcccatctgaaagagcacacattcatcgaaaag
aagccgctgcggttctgtgccgagcggctgacatcacttgtccggaccctggaacttacg
aatatcgaagactaccaagcactccaagaagtggcaactttcgcaacgctcgttgcaacc
tacgaaaagggcttcctgttgatcctggagccgtacgagtccgacacggcagaagtgcca
aaccccacgcttcacttcacctgtctcgatgcggccattgccatccggcctgtgtttgaa
aggttctactcagtcatcataacgtctggaacgatttcccccctcgaaatgtaccccaag
atgctggactttgcgacagtcatacaagagtcctacagcatgacgctcgcccggaaatct
ttcctccccatgattgtgactcgagggagcgaccaggcttccatctcgtcgagctttcaa
gttcgaaacgagccgagcgttgtccgcaactacggcagcctcttgaccgaatttgccaag
atcacgcccgacggcatggtggtcttcttcccgtcgtacctgtacatggagtccatcatc
agcatgtggcagggcatgggcatcctcgacgaggtgtggaagtacaagctcatcttggtc
gagacgcccgacgcacaggagacgtcgctggcgctggagacgtaccggacggcctgctgc
aacggaaggggggccatcctgctctgcgtcgcgcgaggcaaagtatccgagggcatcgac
tttgaccatcagtacggccggacggtgctgtgtatcggcgtgccgttccagtacacggaa
tcacgcatcctcaaggctcggctcgagttcctgcgggaaacgtaccgcatcaaggaaaac
gacttcttgtcgtttgacgccatgcgccacgccgcgcagtgcctgggccgcgtcctccga
ggcaaggacgactacggcgtcatggtgctcgccgaccgacggttccagaagaagaggaac
cagctgccgaaatggatcaaccagggcctgtcggacgccgacaccaacctgagcacggac
atggccgtcagcgccgcccgccggttcctcaagaccatggcgcagccgttccggagcaag
gaccaggagggcatcagcacctggggctacgaggatctcctgcggcaccagaagaagatg
gaggaggagaggggagaggagccgccgcctgtgctcgccaatgcgaggggccaggctcac
ggtagcatagctgctgggtatgagtcggactatggagacattgatgccgatatgatggag
ctggaaggctttgagtga
DBGET
integrated database retrieval system
