Trichoderma reesei RUT C-30: M419DRAFT_4702
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Entry
M419DRAFT_4702 CDS
T06031
Name
(GenBank) DNA replication factor C, large subunit
KO
K10754
replication factor C subunit 1
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03030
DNA replication
trr03410
Base excision repair
trr03420
Nucleotide excision repair
trr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M419DRAFT_4702
03410 Base excision repair
M419DRAFT_4702
03420 Nucleotide excision repair
M419DRAFT_4702
03430 Mismatch repair
M419DRAFT_4702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trr03032
]
M419DRAFT_4702
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_4702
DNA replication proteins [BR:
trr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
M419DRAFT_4702
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
M419DRAFT_4702
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
AAA_22
nSTAND3
AAA_16
AAA_18
AAA_14
AAA_30
BRCT_2
AAA_33
RuvB_N
NTPase_1
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ETS06422
JGI:
TrireRUTC30_1_4702
UniProt:
A0A024SKS8
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MPDIRSFFAPKGGAPPKPAAAKPEPPAKGKRGKGRKVIEDSDDDEVVEETEPKGVAISAD
DYFASSKDPKTAKASQTPKKGDKKTIIEADVPVRSSPRPKKTMAKPAAPEDEDEDEDVAS
RPKRARNSYKAAPAPTHDDDDDDVYMDDGDEDADDIFAADAKGRNKRKNDDYEEEDSEDE
VIPQPRRIASRGRPAASAKKAEEKVKTTPATKKRKSPEQESDEEEELPRKKPAAASKPRA
PRAKKADQPEDEAIQNILDSVATVRAPTPPPKDGKPFDWRKSASGGNASAQPSQPAGELP
EGEEECLSGLTFVFTGVLQTIGREEAQALVKRYGGKVTGQPSSKTSFVVLGDDAGPSKLA
KIRSNGIKTIDEHGLFDLIRKLPAFGGTGKGAQKAQEKKKAEEEKVRQQVAEMEAEEKAQ
RREAEKEAKRLAAARGQPSSTPVKPAAAPTQLLTSKYAPTQLNQICGNKAQVEKIQRWLH
NWPKSKKYNFQKRGADGMGGERAIIISGPPGIGKTTAAHLAAKLEGYDVLESNASDTRSK
KLVEAGLSDVMNNTSLLGFFAGDGKSVHSEKKKIVLIMDEVDGMSAGDRGGVGALAKFCR
KTEVPLILICNERRLPKMKPFDHVAFDIRFNRPTVDQVRSRIMTICHREGLKMPPPVVDA
LIEGSNKDIRQIINMIATAKLDQSTMNFDQTKSMSKAWEKHVVLKPWDICQKMLGGGLFA
PASKATLNDKIELYFNDHEFSYLMIQENYLQTKPMALSGSGYRGREATLKALELFDQAAE
SISDGDLVDRMIHGPQQQWSLMPTHAVFSTVRPASFVAGQLLGSNFTSWLGNNSKAGKLG
RYIREIHSHMRLKSSGDHNEVRQEYLPVLWSQTVDRLQKEGTEAVEEVIDLMDSYYLTRE
DFDAIQELGVGPMDEERVKIETKTKAAFTRTYNSMNHPLPFIKASNVFAPKKQTKEMPDL
EEAIEEEDDAELLEAPDVDEDDEIDLKKDKYIKQPKVKKPAKKASKTSTGDDDDTADSKP
KGRAKAKATSAKGKAKK
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatattcgatcattcttcgcgccaaagggtggtgcacccccgaagcctgcggct
gcaaagccagaaccgccggccaaaggaaagcgaggaaaagggcgcaaggtcatcgaagat
agcgacgatgacgaggtggtagaggagacggaaccaaaaggcgtagcaatatctgccgac
gactactttgcctcctccaaagatcccaagaccgctaaagcatctcaaactcccaagaag
ggcgacaagaagaccatcatcgaggccgatgttcctgtcaggtccagtcctcggcccaag
aagactatggcaaagccggctgcaccggaggatgaggatgaggatgaagatgtagcttct
cgaccgaagagggccagaaattcatacaaggccgctcccgctcccacccacgacgatgac
gacgatgacgtttatatggacgacggtgacgaggacgcggacgatatcttcgccgctgac
gccaaaggccgaaataagcgcaagaacgacgattacgaggaggaagactccgaagacgag
gtcattccacaacccagacggatcgcttcacggggacggcctgccgcttctgccaagaaa
gctgaagaaaaggtaaagacgacgccggcaaccaagaagagaaagtcgcctgaacaggaa
tccgatgaggaggaagagctgccaaggaagaaacctgcggcagcaagcaaaccgcgcgcg
ccaagggccaagaaagcagaccaacccgaggacgaagccatccagaacatcctagacagc
gtggctactgtacgagcgccaacacctcctcccaaggatggcaaaccctttgattggagg
aaatcagcctcaggcggtaatgcctcggcgcaaccttcgcagccagccggcgaactccca
gagggcgaggaagagtgtctcagtggattgacctttgttttcactggcgtgctgcaaacg
attggccgcgaggaagctcaggccctagtcaagcgatatgggggcaaagttacgggccag
cccagtagtaaaacgagtttcgtcgtgctcggagacgatgctggaccgtccaagttggcc
aagatcagatcaaacggaatcaagaccatcgatgagcatggcctctttgacctgatccgc
aagctcccagcatttggcgggacgggcaagggcgctcagaaagcgcaagagaagaagaag
gcggaggaagagaaggtgaggcaacaggttgccgaaatggaagcggaagagaaagcacag
aggcgagaggccgagaaagaagccaagagattggccgcagcccgagggcaacccagcagc
acgcctgtcaagcctgcagccgcgcccacccagctcctcacgtccaagtatgcgccgaca
cagctgaaccagatatgcggcaataaggcacaggtggagaagattcagcgatggcttcac
aactggccgaaatcgaagaagtacaacttccagaaacgtggcgctgatggcatgggaggc
gagcgagccatcatcatctctgggccccccggcattggcaagactacagctgcacacttg
gcggctaagcttgaaggctacgatgttctggagagcaatgcgagcgatacacgaagcaag
aagctagtcgaggccggtctcagcgacgtcatgaacaacacttccctgctgggattcttt
gcaggagatgggaagtctgtccactctgagaagaagaagattgtgctcatcatggacgaa
gtcgacggtatgtcggccggcgatcgcggaggagttggcgccctggccaagttctgcagg
aagacggaggtgcccttgatcctcatctgcaacgaacgaagactgcccaagatgaagccg
ttcgaccatgttgcgtttgatataagattcaaccgtccgacggtcgaccaagtccggtct
cgcatcatgacgatttgccatcgagaaggcttgaagatgcctccgccagtcgttgatgct
ctcattgagggcagcaacaaggatatccgccaaatcatcaacatgattgcgacagcgaag
ctcgaccagtcgaccatgaactttgaccaaaccaagtccatgtcaaaagcgtgggagaag
catgttgtgctcaagccgtgggatatctgccagaagatgcttggtggcggactctttgca
cctgcaagcaaggcgacgctcaatgacaagattgaactctacttcaacgatcacgagttc
agctacctcatgatccaagaaaactacctccagacgaagcccatggccctcagcggctcg
gggtacaggggtcgagaagctactttgaaagcgctcgagctctttgaccaggcggcagag
agcatcagtgacggtgaccttgtggatcgcatgatccacggaccgcagcagcaatggagc
ctcatgcctacgcatgccgtcttcagtactgtgaggcctgcgagcttcgttgccggccag
ttgctggggtccaactttacgtcttggctcggaaataacagcaaagctggaaaattgggc
cgatacattcgagagattcattcccacatgaggctcaagtcatcaggagaccataacgag
gttcgacaggagtacttgcctgtgctgtggtcgcagacggtggatcggctgcagaaagaa
ggaactgaagccgtggaagaggtcattgacctgatggacagctactacctcacccgagaa
gactttgacgccattcaggaactgggagtcggtcccatggacgaggagcgtgtcaagatt
gagaccaagacgaaggctgcctttactcgaacatacaactccatgaaccacccattgccc
ttcatcaaggccagcaatgtctttgcgccgaagaaacaaacgaaggagatgcccgacctg
gaagaagccattgaggaggaagatgacgccgagctgctggaagctccagacgttgacgag
gatgacgaaatcgatctgaagaaggataagtatatcaaacaaccaaaggtcaagaagccg
gcgaagaaggcatcgaagacgagtactggagatgacgacgacactgcggattcaaaaccg
aaaggccgcgccaaggccaaggcaacaagcgcgaagggaaaagcaaagaaataa
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integrated database retrieval system
