Trichoderma reesei RUT C-30: M419DRAFT_5956
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Entry
M419DRAFT_5956 CDS
T06031
Name
(GenBank) Ku70/Ku80 N-terminal alpha/beta domain-containing protein
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
M419DRAFT_5956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_5956
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
M419DRAFT_5956
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_PK_bind
Ku
Ku_N
VWA
VWA_2
Motif
Other DBs
NCBI-ProteinID:
ETS05635
JGI:
TrireRUTC30_1_5956
UniProt:
A0A024SJE1
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MADKEATVFIIDLGASMAAVNGGREESDLDWSMSYVWDKISNVVASNRKTLCVGVVGFRT
DETNHTLSEDGYENISILQPLGPMSMSSLKALQPKVKPSRTVEGDAISAIVIAVDMIDKY
TKKNKWKRQIVLITDGQGEIDPDDIGDIARKMRDSNIELTVLGVDFDAPDYGFKEEDKPS
VKKQNEETLKKLVDGCGDDSRFASMVEAIDDLNEPRAKSVKPYKTYEGLLTLGDPKNAPA
VVEIRVERYFKTHLARPPAASTVVVKEEQAGPSQADEDEQMDGAELTAVRQARTYKVNDP
DAPGGKRDVEFESLAKGYEYGRTAVHISESDQNVTKLATEKSFKIIGFVQKEKYEMLLNL
GETCVTVASKYDEKSELAFSSLVWALSELDAYAVARLVTKDQKDPMLVLLMPYMEPDYVC
LYDVPLPFAEDIRTYQFPPLDRVVTVSGQTLTNHRLLPSDELNQAMSDYVDAMDISSYGI
DEDGQPAEYATIDELYNPAIHRIGHAIKQRAIHPEKPVPEIPPVLLRFAAPPTELVETVQ
PHIDALIHAADVKKVPPKAKGKRQRETVKPISGLDVDALLGEEQKGSISPENAIPDFKRA
LNSSEEVEQIADATKQMGAIVRSLITDSFGDSKYAQAMEGIGAMREELINLEEPGLYNDF
VRDLKKSLLSGALGGDRRDFWFKMRWAKLGLIDKKQSEVSSVTLEEADEFYKSR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggaagcaaccgtcttcatcatcgacctcggcgcgtccatggcagctgtc
aatgggggtcgagaagaatccgaccttgattggagcatgagctacgtctgggacaagatc
agcaacgtcgtggcctcgaatcgcaagacgctgtgcgttggcgtcgtggggttcagaacc
gacgagacaaaccacacgctgagcgaggatgggtacgagaacatctccatattgcagccc
ctggggccgatgagcatgtccagcctcaaggctcttcagcccaaggtgaagccgagcagg
acggtggaaggcgatgccatctcggcgattgtcattgccgtcgacatgattgacaagtac
acgaagaagaacaaatggaagcggcagattgttctcattaccgacggccaaggcgagatt
gatccagatgatattggcgacattgctagaaagatgcgcgactcgaatattgaattgaca
gtcttgggcgtcgactttgatgctcccgattacggcttcaaagaggaggacaaaccttca
gtcaagaagcaaaacgaagagaccctaaaaaagctcgtggatggctgtggcgacgactca
aggttcgcctccatggtcgaggccattgacgacttgaatgagccacgagcaaagtcggtc
aagccttacaaaacgtacgaaggtctcttgaccttgggagatccgaaaaacgctcccgca
gtggtggaaatccgcgtcgagagatacttcaagacccatctagccaggccacctgccgcc
agcaccgtggtggtcaaggaggagcaagctgggccgtctcaggcagacgaggacgaacag
atggacggagcggaacttacagctgtgaggcaggccaggacatacaaggtcaatgatcca
gatgcccctggcggtaagcgtgacgttgagtttgagtctctggccaaagggtacgagtac
ggcaggacggcagtccacatcagcgagtctgatcaaaacgtcaccaagctcgcgacagaa
aagagcttcaagatcatcggcttcgtccagaaagaaaagtatgaaatgctccttaatctt
ggcgaaacctgcgttaccgttgcatccaagtacgatgaaaagtctgagctggcttttagc
tctctggtgtgggcgctctcggagctcgacgcctacgccgtggcccgcctagtaactaag
gaccaaaaggaccccatgctggtgttactgatgccgtatatggagcctgattatgtttgt
ctctatgatgtgcctctgcctttcgcagaggacatcaggacgtaccagtttcctcccttg
gacagagtcgttaccgtcagtggccaaacgctcaccaaccatcgcctattgccatccgac
gagctcaaccaagcgatgagcgactacgtagatgccatggacatttcaagttatggtatc
gatgaagatgggcaaccggctgaatatgccaccatcgatgagttatacaaccctgcgata
catcgcataggccatgcgatcaaacaacgagcgatccacccagagaaacccgtgcccgag
atccccccagtcttgcttagattcgcagcacccccgacagaactcgtcgagactgtgcag
cctcatatcgatgcactgattcacgctgcagacgtgaagaaagtgccgcccaaggccaag
ggcaagcgccaaagagaaacagttaaacccatctcgggactggatgtggatgcccttctg
ggagaagagcagaaaggttccattagtccggagaatgccattccggacttcaaacgagcc
ctcaactcgtccgaagaagtcgagcagattgccgacgccacaaaacaaatgggggccatt
gtgcggtctctcattacggacagcttcggggatagcaaatatgcccaggcaatggaaggc
attggtgcgatgcgtgaggagctgatcaacctggaagagcctggcctgtacaacgacttt
gtgcgcgacttgaagaaaagtttgctatctggagccttgggtggtgacaggcgagatttc
tggttcaagatgaggtgggcgaagctgggcctgattgacaagaaacagtcggaggtgtct
tcggtcactcttgaggaggcggacgagttttacaagtcgaggtga
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