Trichoderma reesei RUT C-30: M419DRAFT_6020
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Entry
M419DRAFT_6020 CDS
T06031
Name
(GenBank) WD40 repeat-like protein
KO
K24752
WD repeat-containing protein 70
Organism
trr
Trichoderma reesei RUT C-30
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trr04121
]
M419DRAFT_6020
03036 Chromosome and associated proteins [BR:
trr03036
]
M419DRAFT_6020
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_6020
Ubiquitin system [BR:
trr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
M419DRAFT_6020
Chromosome and associated proteins [BR:
trr03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
M419DRAFT_6020
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Others
M419DRAFT_6020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
MIOS_WD40
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_SPT8
Motif
Other DBs
NCBI-ProteinID:
ETS05704
JGI:
TrireRUTC30_1_6020
UniProt:
A0A024SM55
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MDSDDDDAMRAFLPASFGKQSKEADIAAQIERSRRKVDVPSATGQESKKKDGSGGSDSDN
DSDDSDDSEDEDEFPVSHEIVLKTQERAVTSVSLDPAGGRLASGSLDCTIKLHDFASMTP
TTLRAFRSIDPFVSKRTAATAEAHPVHHIEFNPLAGSAMLCVCAHPQARILSRDGDILAE
FVKGDMYLRDMHNTKGHISEITTGTWHPTDKNLCVTAGTDSTLRIWDINNKRSQKDVIVF
KSKAAGSAGRTKMTAVAWKNSAQGSSVLIGAALDGSLVMYSGNGPFTRPAGEIREAHKAQ
TWTSGIDISSDGRMVVTRGGDDLIKLWDIRKFDKPLVTVSHPSTSDIYPTSNIRYSPNST
SIITGSATGHLHILNPGNLQPEHVTPITPGSALIAVDWHPKINQIVTGSANAETHVLFNP
SMSSRGAVEVMSRAPKKRHIDDNPEFTMDQNVGISGDSIVTPGAMQGSRKAGVTGTGKSK
DPRRPEVPLQTPFQKSQPDERHIAENIPLAKMLHEDPREALLKYADKAQSDPMFTKAWTK
TQPETQYAQLSDDEDEGPEKKRAKR
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgacgacgacgacgcgatgagggccttcttgcccgcctcgttcggtaaacag
tctaaagaggctgatattgcggcccagattgagcgaagtcgaagaaaggtggacgtgcca
tccgcgacgggtcaggaatcgaagaagaaagatggctcaggcggtagcgattccgacaac
gacagcgacgattccgacgattcagaagacgaagacgagtttcccgtatcacatgagatt
gttctaaagactcaagagcgcgccgtcacctcagtatctctagaccctgccggtggcaga
ctggcctctggttcattggactgcaccatcaagctgcacgacttcgcctcgatgaccccg
acgacgcttcgcgcattccgcagcattgacccctttgtatccaagagaactgctgccact
gcagaggcccatcccgtccaccatatcgagttcaacccattagcgggcagtgccatgcta
tgtgtatgcgctcacccacaggcaagaatactatcgcgcgacggagacatcttggcagaa
tttgtcaagggagacatgtacctccgcgatatgcacaacaccaaggggcacatttccgaa
atcacaaccggcacctggcaccctacagataagaatctttgtgtcacagcaggcactgat
agcacgctgcgaatatgggatatcaacaacaagcgctcgcaaaaggacgtcatcgtgttc
aagtcaaaggctgcaggctcagctggccggaccaagatgactgcagttgcatggaagaac
tctgcccaaggaagcagcgtgctcatcggcgccgccctagacggatcgctggtcatgtac
agcggcaacgggccctttaccaggcctgcaggcgagatcagagaggcgcacaaagcccag
acttggacaagcggcattgacatctcctctgatggccgcatggttgtgacgcgaggcggc
gacgacttgatcaagctctgggacattcgaaagttcgacaagcctcttgtcacggtgtcg
cacccatccacttcggacatctacccaacgagcaacattcgatattcaccaaactcgacc
agtatcatcaccggctctgccacaggccacctgcatattctgaaccccggcaatctacag
ccagaacatgtcactccgattacgccgggatcagccctgattgctgtggattggcatccc
aagattaaccagattgtcacaggctctgcgaacgccgagacgcatgtgttgttcaacccg
tccatgtccagccgcggtgctgttgaggtgatgtcgcgagcccccaagaagaggcacatt
gacgacaaccccgagttcacaatggaccagaacgtcggcatctcgggcgactccatcgtc
acgcccggcgccatgcagggctcgcgcaaggccggcgtcacgggcactggcaagtccaag
gatcctcgacggccggaggtgcccttgcagacgccgttccagaagagccagccggacgag
cggcatatcgcggaaaacattcctctggcaaagatgctgcacgaggatccccgtgaggcg
ttgctgaagtatgctgacaaggcccagagcgacccgatgttcaccaaggcatggacgaag
acgcagccagagacgcagtacgcgcagctgagcgacgacgaggacgaggggcccgagaag
aagcgagcgaagcggtga
DBGET
integrated database retrieval system
