Trichoderma reesei RUT C-30: M419DRAFT_61089
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Entry
M419DRAFT_61089 CDS
T06031
Name
(GenBank) DEAD-domain-containing protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
trr
Trichoderma reesei RUT C-30
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_61089
03041 Spliceosome [BR:
trr03041
]
M419DRAFT_61089
03036 Chromosome and associated proteins [BR:
trr03036
]
M419DRAFT_61089
Enzymes [BR:
trr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M419DRAFT_61089
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
M419DRAFT_61089
mRNA cycle factors
Common to processing body (P body) and stress granule
M419DRAFT_61089
Spliceosome [BR:
trr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
M419DRAFT_61089
Chromosome and associated proteins [BR:
trr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
M419DRAFT_61089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
HEM4
ResIII
Motif
Other DBs
NCBI-ProteinID:
ETS00951
JGI:
TrireRUTC30_1_61089
UniProt:
A0A024S8Z1
LinkDB
All DBs
Position
Unknown
AA seq
511 aa
AA seq
DB search
WDGNARVYAWSDEYGDVGPEIAELEAELFGSPEDRDQRIGGGLDFSAIDSIEVIQEGPQR
IEYIKTFEDAGLHPVMAKNVELSGYQVPTPIQKFTIPAILQSYDVIGIAQTGSGKTAAYL
IPILSKLMGKAKKLGAPRPNPLTFQEGIDNVTAEPLVVVVVPTRELAVQIFNEARKLCYR
SMLRPCVVYGGVPIREQLGLLSRGCDVLIGTPGRLKDFIGRPDKVTLRRLKYMVIDEADE
MLNQDWEDELRPILSGGGKFSLMKAFHGCCNVKYGLFSATFPRAARTLAKEYLSASHVRF
RVGRAGSTTVNIRQMVIETSREKKNELLLTLLEEMNGVRTIIFVNSRQAADTLDDFLYNM
KLPVTSIHSDRTQVEREAAMRAFRSGQAPILVATGVTARGIDVRNVMHVINYDLPSMEYG
GIEEYTHRIGRTGRIGHRGVATSFFTDRDEPIASVLTRTLLETKQEIPAFLQQYIPENYA
EGNKVKFETESDFDPNDVAGAGDAAGGGWGG
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
tgggacggaaacgctcgtgtatacgcctggagtgacgaatacggcgatgtcggtcctgag
attgctgaactcgaagctgagttgtttggatcgcctgaggaccgcgatcagcgtatcggt
ggtggtcttgatttctccgctatcgacagcattgaggtcattcaggaaggcccccagcgg
attgaatacatcaagacctttgaggatgccggactccatcctgttatggccaagaatgtt
gaactttcgggatatcaggtcccaaccccaatccaaaagttcaccatcccagccattctt
cagagctatgatgtgattggcattgctcaaaccggttcgggaaagaccgccgcctacctt
attccgatcttgagcaagttgatgggaaaagcgaagaaactcggggcacctcgtcccaac
cctctcacgtttcaggagggtattgacaacgtgaccgcagagccgcttgtcgttgttgtt
gtgccaactcgagagctggccgtgcagatctttaatgaggccagaaagctctgttaccgg
tcgatgctccgtccctgtgttgtttacggcggcgttccaattcgcgaacaactgggactt
ctttcccgcgggtgtgatgttctgattggtacccctggtcgcctcaaagactttatcgga
cgccctgacaaggtgactcttcgtcgcctcaagtacatggtgattgatgaagccgacgag
atgctgaaccaagattgggaggacgaacttcgccccattctctctggaggaggcaagttc
tcacttatgaaagcctttcatggatgttgcaatgtcaaatatggacttttctccgccacg
ttccctcgtgctgctcgaaccctcgccaaggagtacttgtctgcgtcccatgtgcgcttt
cgagttggccgagctggaagcacgacggtcaatatcaggcaaatggttatcgagaccagc
cgggagaagaaaaatgaacttctgctcacgctcctcgaggagatgaacggggtccgcacc
atcatcttcgtcaacagccgccaggctgccgacacactcgacgacttcctctataacatg
aagctccccgtcacttccattcacagtgaccggactcaagttgagagagaggcggccatg
cgagcctttcgaagcggccaagctccaattctcgtggccaccggcgtcacggcccgcggc
attgacgtccgcaatgtgatgcacgtcatcaactatgatctgccctccatggagtatggc
ggtattgaagaatatactcatcgcatcggtcgtactggtcgcatcggtcaccgaggagtg
gccacctccttctttaccgatcgagatgagcctattgcaagcgttctcaccaggaccttg
ttggaaaccaagcaggagattcccgcgttcctgcagcaatatatcccagagaactacgct
gagggcaacaaggtgaagtttgagacggagtcagactttgatcccaatgacgttgcgggt
gctggagatgctgcgggaggtggctggggcgga
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