Trichoderma reesei RUT C-30: M419DRAFT_63277
Help
Entry
M419DRAFT_63277 CDS
T06031
Name
(GenBank) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03018
RNA degradation
trr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
M419DRAFT_63277
09123 Folding, sorting and degradation
03018 RNA degradation
M419DRAFT_63277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_63277
03041 Spliceosome [BR:
trr03041
]
M419DRAFT_63277
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
M419DRAFT_63277
mRNA degradation factors
5'-3' decay
Lsm complex
M419DRAFT_63277
Spliceosome [BR:
trr03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
M419DRAFT_63277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF6897
DUF150_C
Motif
Other DBs
NCBI-ProteinID:
ETS03489
JGI:
TrireRUTC30_1_63277
UniProt:
A0A024SDU8
LinkDB
All DBs
Position
Unknown
AA seq
100 aa
AA seq
DB search
GSSNAQGERPKKENILDLAKYMDKEIIVKFNGGREVRGTLKGYDALMNLVLDQVQETLRD
DEGNESSRSLGLVVVRGTLLVLISPADGSEEIANPFAQPE
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
ggctcgtccaacgcccagggtgagcggcccaagaaggagaacatcctggacctggccaag
tacatggacaaggagatcatcgtcaagttcaacggcggccgtgaagtccgcggcactctg
aaaggctacgacgccctcatgaacctggtcctcgaccaagtccaggagacactccgagac
gacgaaggcaacgagtcatcccggtcccttggtctcgttgtcgtccgaggcacgctcctc
gtcctcatcagccccgccgacggcagcgaagagattgccaatccttttgcccagcctgaa
DBGET
integrated database retrieval system
