Trichoderma reesei RUT C-30: M419DRAFT_68022
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Entry
M419DRAFT_68022 CDS
T06031
Name
(GenBank) hypothetical protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M419DRAFT_68022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trr03032
]
M419DRAFT_68022
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_68022
Enzymes [BR:
trr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M419DRAFT_68022
DNA replication proteins [BR:
trr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
M419DRAFT_68022
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
M419DRAFT_68022
Bloom's syndrome complex (BTR)
M419DRAFT_68022
FA (Fanconi anemia) pathway
M419DRAFT_68022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
ResIII
HRDC
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
ETS06246
JGI:
TrireRUTC30_1_68022
UniProt:
A0A024SMM9
LinkDB
All DBs
Position
Unknown
AA seq
1663 aa
AA seq
DB search
MTRNNLSGHLTWLLKNAALSKPAARELPQASDSASFRFSQSQSASGRTAEPSQATTVSAG
GDRRTHQVQDSWSSNGPPKREEGSLGTEVVAVEDDDMGRLNLSAGSKKPSLLSQNGRLAT
PSSESQYKQRLNETLKTSGARTEEFPGPSRRSPSPGFDADFADFDVDDLEYMDLTRTTGA
SDESDEFGEDVKVWTEKDASWEAPLPKSKKRKSADAGDAVAGADTQFPDVYQILGTSPPA
PTPGRQSAKKVSSAVPKPQVPRKPIVINRPQSVKAPSSKLPLVGSSSPLGRVANRRSPSP
IKRTPEKDYAITSSERRKKAKVSGQRSASPEPLTFDKHVHQTEHRQSDEYCIPDSDDEFV
TPPSVPAAARKDQVKPVANPEEDDFIMDQSFTPSSQTSRLLSRILSNPQLLAKRCDSLDK
QIQQNDRDFMKAINDRLPKDKRDEIKAEKEALVRQQKATQELDQSVKHYRSLHQQREAVA
QQVARSYAEGANTDEQEARLDELTEHVETKERELSQMLAAAGINEANLLETLEYPATSRA
DDHIVVLGTQAGHGGMVNMSRSSRDVPLPLGGTQVVHQTQLPEPVRSQLWNEANSAQRLT
GGSGVLSPDDQNSRSEPFPRQSSRTTQLPNYASTSGPRSVPTLDHDVDAEEDFFSDIDDM
DMQLLPKPAKKATLADTRKAPQRSRTQRAANEFSDFSDDADMLAFAQDYDLRQSAREPPS
DSRRAFSETSGNAVPAPKQKQVPKRQPPPDPSQTRIPAELMRHPWSADVQKTLKDRFRMK
GFRQNQLEAINATLAGDDAFVLMPTGGGKSLCYQLPAVVKSGKTRGVTIVVSPLLSLMQD
QVDHMKALGIQAVAFNSECSPEYKRQVMSAFDERNPEHFIELLYVTPEMASKSPQFMNAL
QNLYRNKKFARIVIDEAHCVSQWGHDFRPDYKTLGQLRAKFPQVPVMALTATATQNVIVD
IKHNLRMKNCQVFSQSFNRPNLYYEVRPKGSNPVVTQQIAALIKAKYPNVTGIIYTISRK
QAEDVAQKLCEHGITARHYHAQITPSEKVEVQTAWQKGQIKVVVATIAFGMGIDKPDVRY
VIHHGIPKSLEGYYQETGRAGRDGKPSDCILFYGKGDIRVLKKLILDGEGNNEQKERQMV
MLNRVTAFCDNKADCRRTEVLRYFGEDFSPSQCNKTCDNCQAGLVFEQQDFSEYAIAAIR
IVQQQHRLTANQCADILIGRKYPDNEMQNSDDYHGMAKGMKKHEMVRVIDRLSAEKGFHE
DNVVGNHGVAIQYLQIGPAANQFLTGRRKLMLTVQVSDSGDGDQSKAKRPKASRKQKEPA
NNVQSTYVSSPVNARRRRATVVDSDDESNLPTTAHGYVNDGFVVSDEEMEDEGEEDLADE
DEAFEPLPQHRPAKPTNSRSSSKQTPLAEPHPGRLKLEDLPEIHQDMVDNFVQEARQLEE
RIRNRLDVRRPMFTDSQLQEMAINWTTSLDSMKRIPGIDVDKVDKVGKKLISILEEYHKL
YREIAAAESGGAGASASNLNQEIVDLISSDLEADEDEEEAMGMEEDSHYFAPKPPANVQA
FHDRLQSLNSQPSQSRGRSYSRGGGGGGGGGRRRYSGGKKWSRKGASGGGSQRRGSGSGA
RGGGSGGGGGGSSSRSGGGSSGGFKRDGKIVKKSGGGIGLMPL
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaaataacctgtcaggccacctcacctggttgttgaagaacgccgccttatca
aagcccgccgctcgagagcttccccaagccagcgattcagcatcctttcgattttcgcaa
tcccagtctgcaagcggtcgtacggcagaaccaagtcaggctaccactgtatcagctgga
ggagacagacggacacaccaggtgcaggactcctggagctcaaatggcccgccgaagaga
gaagagggttccctgggtacagaagtggtggcagtagaggacgacgacatgggccggcta
aacttgtctgccgggtcaaaaaagccttcgcttttgtcacaaaatggcagactggcaacg
ccgtcatcagaaagccagtacaaacagcgcttgaatgagactctcaagacgagtggtgcc
cgaacagaagaattccctggcccgtcacgccgcagcccatctccaggattcgacgctgat
tttgcggacttcgatgttgacgatctcgagtacatggacctcacgagaacaactggcgcc
tctgatgaatctgatgagtttggcgaggatgtcaaagtctggaccgaaaaggacgcatcc
tgggaggcaccgttgcccaagtcaaagaagaggaagagtgccgacgctggtgatgctgtc
gctggtgccgatactcagtttcctgatgtctatcagattctgggaacctctcctcctgcc
ccgactcccggtcgacagtccgcaaaaaaggtcagttctgctgtgccaaaacctcaagtt
ccacggaagcccattgttattaatcgaccacagagtgtcaaagcaccgtcttccaaatta
cctttggtagggtcgtcatctcccttggggcgtgttgccaatcgaagatcaccgtctcct
atcaagcgaactccagagaaagactatgccatcacgagctccgagagacggaagaaggcg
aaagtttctggtcagcgttctgcgtctccagagcctctaacttttgacaagcacgtccat
cagactgagcatcgccaatccgacgagtattgcattcctgattctgacgacgaatttgtg
accccgccgtcagttccagctgctgcgaggaaggaccaggtgaagccagtagccaacccg
gaggaagatgacttcatcatggatcagtcattcacgccatccagtcagacatcaagacta
ttgtccagaatattgtcgaatccgcagcttctagcgaaacgatgcgattctttggataag
cagatccagcagaatgaccgggacttcatgaaagccatcaatgacagattgccgaaggac
aagagggacgagatcaaagcggagaaagaagcgctcgtcagacaacagaaggcgactcag
gagctcgatcaatcagtgaagcactacagaagcttacaccagcagcgagaagcagtggcc
cagcaggtagcccgatcatacgccgaaggcgcaaacacagatgaacaagaagcccgactg
gatgagcttaccgagcacgtcgagacgaaagagcgagagctctcccagatgctggccgca
gcaggcatcaatgaagccaacctactagagactctggagtatcctgccacgagccgggcc
gatgaccatatcgttgtgctcggcacccaggctggtcatggaggcatggtcaacatgtcg
cggagttcaagagacgttccattgcctcttggagggactcaggtcgttcaccagacccag
ctcccggagcccgttcggtcacagctctggaacgaggccaattcggctcagaggttgaca
ggtggaagtggggttctatccccagatgaccagaactcacgatctgagccatttccacga
cagtcatcccggactactcagttgccgaattacgcctcgacatctggtccaagatcagtg
ccgacactggatcatgatgtggacgccgaggaagatttcttctctgacattgatgacatg
gatatgcagctgctgcctaaaccggcgaagaaggccactctagccgacacacgcaaggca
cctcagaggagtcgcactcagcgcgcagcaaatgagtttagcgacttcagtgacgatgct
gatatgcttgcatttgctcaagactacgatctacgacagtctgctcgcgaaccgccctcg
gactcccgacgagcattttccgaaacatctggaaatgctgtgccggcgccgaagcagaag
caggttcctaaaagacaaccgcctcccgatccatcccagacaaggataccggcggagctc
atgaggcatccttggtctgcagacgtacagaaaacgttgaaagatcggttccggatgaag
gggttccggcaaaaccaactggaagcgatcaacgccaccctcgcaggagacgatgccttt
gtgctaatgccaacgggtggtggaaagtccctctgctatcagcttccggctgtggtaaag
tccggcaaaacaagaggtgtcacaatcgtcgtatcccctctgctgagcttgatgcaagat
caagtagatcacatgaaagctttggggatacaggccgttgcgttcaacagcgagtgctcg
ccagagtacaagcggcaagtcatgtctgctttcgatgagcggaatccagagcacttcata
gagcttctctatgtcacccccgaaatggctagcaaaagccctcagttcatgaacgccctg
caaaatctgtaccggaacaagaaatttgcccgcattgtcatcgatgaggctcactgcgtt
agccagtgggggcatgactttcgtcctgactacaagactctgggacagcttcgagccaag
ttccctcaggtccctgtcatggcattgacggccactgccacacaaaacgtcattgtcgac
atcaaacacaatcttcgtatgaagaactgccaggtcttttcgcaaagcttcaaccgcccg
aacctgtactacgaggtccggcccaaaggctccaacccggtggtgacgcagcagattgct
gccttgatcaaagccaaataccccaacgttactggaatcatctacacgatttcgcggaag
caggccgaggatgttgcccagaagctctgtgagcacggcataacggcgcgtcactaccat
gctcaaatcacgccctcggagaaggtggaagtacaaactgcgtggcaaaagggccaaatc
aaagtcgtcgtggctacgattgctttcgggatggggattgataagccagacgtgagatat
gtgatccaccatggcatcccaaagagcttagaaggctattatcaggaaactgggcgtgcg
gggcgagacgggaaaccctccgactgtatcttgttctacggaaaaggggacataagagtc
cttaagaagctgattctagacggagagggcaacaacgagcaaaaggaaagacagatggtg
atgctgaaccgcgtgacagcattctgtgacaacaaggcggattgtcgacgaaccgaggtc
cttcgctactttggagaggactttagtccgtcacagtgcaacaagacttgcgacaattgc
caggctgggcttgtattcgagcagcaggacttttccgaatacgccatagccgccatccga
attgtccagcagcagcacaggctgaccgcaaaccagtgtgcggatattctgattgggaga
aagtacccggacaatgaaatgcagaattcggacgactatcacggcatggccaaggggatg
aagaagcacgagatggtccgcgttatcgaccgcctctcggctgagaagggcttccatgag
gacaacgttgttggcaatcatggagttgctattcaatatctccaaatcgggcctgccgcc
aaccagtttttgacggggagacgaaagcttatgctgacggtccaggtttctgacagtggc
gatggagaccagtcgaaggccaagagaccaaaagccagcaggaagcagaaagagccggct
aataacgtgcaatccacatatgtctcgtctccagtcaacgcacgcagaagaagagcgaca
gtggttgacagtgacgacgagtccaacctacccaccaccgcgcacggctatgtgaatgat
ggctttgtcgtctcggacgaagagatggaagatgaaggcgaagaggacttggccgatgag
gacgaagcctttgagccactccctcagcaccgaccagcaaaaccaaccaactcgcgctcc
agctccaaacaaacaccactggccgaacctcatccaggcagactgaagctggaggatttg
ccagagattcatcaggatatggtggataatttcgttcaagaggcacgccaactggaggag
cgcattcgtaacaggcttgacgtgagacgaccgatgtttacggactctcagttgcaagaa
atggccattaactggactacctcactcgacagcatgaaacgcatccctggcattgacgtc
gacaaagttgacaaggttggcaagaagctgatatcaatcttggaggaataccataagtta
tatcgcgagattgctgcggcggagtctggtggtgccggcgcatcagcttccaacttgaat
caagaaatagtggacctgatcagttcggatctcgaggctgatgaggatgaagaggaggcc
atggggatggaagaggactctcactactttgcgccaaaaccacccgcgaatgtgcaagca
tttcacgacaggctgcagagcttgaatagccagccgagccaatccaggggcagatcatac
agccggggaggaggaggaggtggtggtggcgggcgaaggagatactctggtgggaaaaaa
tggtccaggaaaggggcctctggtggaggctcccagcgccgaggtagtggttctggcgcg
agaggcggcggctccgggggcggcggcggtggttcgtcatctcgatcaggcggagggagc
agcggcgggttcaagcgcgacggcaagatcgtcaagaagagtggaggagggattggtttg
atgcctttatga
DBGET
integrated database retrieval system
