Trichoderma reesei RUT C-30: M419DRAFT_69637
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Entry
M419DRAFT_69637 CDS
T06031
Name
(GenBank) HIT-like protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M419DRAFT_69637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_69637
Enzymes [BR:
trr01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
M419DRAFT_69637
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
M419DRAFT_69637
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
M419DRAFT_69637
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
M419DRAFT_69637
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
M419DRAFT_69637
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2HE
DcpS_C
HIT
Motif
Other DBs
NCBI-ProteinID:
ETS06160
JGI:
TrireRUTC30_1_69637
UniProt:
A0A024SLQ4
LinkDB
All DBs
Position
Unknown
AA seq
323 aa
AA seq
DB search
MQQEQDEPPSKRAKQDASKAKTPPKVAKLMAPKPSSSTPASSQPTLKPPSSKPHPFNKNR
MALGAYIDSPESFPPSIVIYHTADFVVIHDKFPKATVHTLLLPRSPRHRLLHPFEALQDV
EFLGKVQAEVDKLKVLAAGELQRKLGRFSRSDARREAVLNGEAEPEEDDETARDRGSIRQ
QQQRDQDVGEEGEEGEEEETHTRGKETTKEPRLPQGRDWLAEIRCGVHAVPSMGHMHVHV
FSRDMHSPCLKHRKHYNSFNTPFLVDIAEFPLAREDIRRGRGTREESFMKRDLVCWRCGR
NFGNRFKELKGHLEDEFEEWKRE
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggagcaggacgagccgccgtcgaagcgggcaaagcaggatgcgtctaaggca
aaaactcccccaaaagtcgccaaactcatggccccaaaaccatcatcctcaacccccgca
tcatcacaaccaaccctcaaacccccgtcctccaaaccgcaccccttcaacaagaaccgc
atggccctcggcgcctacatcgactcccccgaatccttcccgccctccatcgtcatctac
cacaccgccgacttcgtcgtcatccacgacaaattcccaaaggccacggtgcacaccctg
ctcttgccgcgatcgccccggcatcgcctcctgcatcccttcgaggcgctccaggacgtc
gagtttctgggcaaagtacaggccgaggtggacaagctcaaggtccttgccgccggggag
ctgcagaggaagttgggcaggttcagtcgctccgatgcgaggcgggaggccgttctcaac
ggtgaggcagagcctgaagaagatgatgagacagcacgagaccgcggatcaatacgacaa
caacaacaacgagatcaagatgtaggagaagaaggagaagaaggagaagaagaagagaca
catacacgaggaaaggagacaacaaaggaacctcggcttccccaaggaagagactggctc
gcggagatacgctgcggcgtccacgccgtcccgagcatgggacacatgcacgtccacgtc
ttctcgcgcgacatgcactcgccgtgcctcaagcaccgcaagcactacaactcgttcaac
acgcccttcctcgtcgacattgccgaattcccgctcgcaagggaggacattcggcgcggc
agaggcacccgcgaggagagcttcatgaagagggatctggtgtgctggcgctgcggcagg
aattttggcaatcgcttcaaggagctcaaggggcatctcgaggacgagtttgaggagtgg
aagagggagtga
DBGET
integrated database retrieval system