Trichoderma reesei RUT C-30: M419DRAFT_69641
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Entry
M419DRAFT_69641 CDS
T06031
Name
(GenBank) small nuclear ribonucleo protein SmF
KO
K11098
small nuclear ribonucleoprotein F
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
M419DRAFT_69641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_69641
03041 Spliceosome [BR:
trr03041
]
M419DRAFT_69641
03032 DNA replication proteins [BR:
trr03032
]
M419DRAFT_69641
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
M419DRAFT_69641
Spliceosome [BR:
trr03041
]
Complex A
U1 snRNP components
Sm proteins
M419DRAFT_69641
U2 snRNP components
M419DRAFT_69641
Complex B
U1 snRNP components
M419DRAFT_69641
U4/U6.U5 tri-snRNP components
M419DRAFT_69641
Complex C
U2 snRNP components
M419DRAFT_69641
DNA replication proteins [BR:
trr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
M419DRAFT_69641
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-ProteinID:
ETS06766
JGI:
TrireRUTC30_1_69641
LinkDB
All DBs
Position
Unknown
AA seq
90 aa
AA seq
DB search
MSFVPVNPRPMLQDLVDKTVLVRLKWGETEYKGRLVSIDSYMNLQLANTEEYLNEKLTGE
LGQVLIRCNNVLYIRGADQKDSSADVKMEG
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgtgccggtgaaccctcggcctatgctgcaggacctcgtcgacaagacggtc
ctcgtgcgcctgaagtggggagagacggagtacaaggggagactggtgtccatcgacagc
tacatgaatctccagctggccaacaccgaggagtacctgaacgagaagttgacgggcgag
ctgggccaggttctgatcaggtgtaacaacgttttgtacatccgcggggccgatcaaaag
gacagcagtgcggacgtcaagatggagggttga
DBGET
integrated database retrieval system
