Trichoderma reesei RUT C-30: M419DRAFT_70959
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Entry
M419DRAFT_70959 CDS
T06031
Name
(GenBank) prokaryotic type I DNA topoisomerase
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03440
Homologous recombination
trr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M419DRAFT_70959
03460 Fanconi anemia pathway
M419DRAFT_70959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trr03032
]
M419DRAFT_70959
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_70959
Enzymes [BR:
trr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M419DRAFT_70959
DNA replication proteins [BR:
trr03032
]
Eukaryotic type
DNA Topoisomerases
M419DRAFT_70959
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
M419DRAFT_70959
FA (Fanconi anemia) pathway
M419DRAFT_70959
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
ETS05640
JGI:
TrireRUTC30_1_70959
UniProt:
A0A024SJE7
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MRVLCVAEKPSISKAVAGHLSGGSFTTHNTRNKYIKNYSFDFDFGQQWGSSSVTMTAVTG
HLTNVEFTSEYKNWSHPPPESLFAAPIVTNDKKDIAKNIADQAKYARLLVIWTDCDREGE
HIGQEIVDAAKKGNASIQVKRARFSNVERAHVLSAARRLVELDEKQVNAVAARIELDLRI
GYAFTRFLTNNLKQLGGPLADLVLSYGSCQFPTLGFVVDRYFRVKNFVPEPFWGISLTHN
KDGKQVRFSWARNRLFDRMTVVILYERCLAAKKAKVTKVQEKPTRKFKPLPLTTVELQKA
ATRLLRMSGQQAMTIAEGLYNKGFISYPRTETDRFDKGMNLRALVQKQATDQRWGTYAQG
LVNGGFRQPREGKHDDKAHPPIHPIAHVAPSALSYDEGRLYEYVVRRFLACCSEDAQGMA
TDIDVQFGDERFSTRGVIVLERNYLDVYIYENWTNTTELPRFTVGEQFEPTEAMMTEGKT
SPPNYLTEADLIALMDANGIGTDATMAEHIQKIQDREYVATTTRGGTTAADGDDEEHDEA
PAARGGRGRGRGRGGRGRGGGGSTRGGSGSGIKVFVPTQLGVALILGFDRMSFETSLGKP
FLRKEMELQMKAICQGSTTRREVLDRSIAQYKQVFLQSQEQVGVLKQACREFIFGQGPRA
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgagggtcctctgcgtggctgaaaagccatccatctccaaggcggtggctggccatctc
tccggaggctcctttacaacacacaacacccgcaacaaatacatcaagaactactccttt
gactttgactttggccagcaatggggatcctcgtccgtcaccatgaccgccgtgactggc
catctgaccaatgtcgagttcaccagcgagtacaagaactggagccatcctccaccagag
tcgctctttgccgcgccgatagtgaccaacgacaagaaagacattgccaagaacatagca
gatcaagccaaatatgcgcggctgctggtgatatggaccgattgtgatcgagaaggggag
cacattggccaagagattgtcgacgcagccaaaaagggcaatgcctctatccaagtgaaa
cgtgccagattcagcaacgtcgagcgagcgcacgtgctgtcggctgccagacgtcttgtt
gagctggacgagaagcaggtcaacgctgtcgcggcaagaatcgaactggatctccgtatc
gggtacgcttttacgcgcttccttacgaacaatctcaagcaactaggtggaccactggca
gatttggttctgagttacgggtcctgccagttcccaacgctgggcttcgttgtggaccgg
tactttcgtgtcaagaatttcgtgcccgagcctttctggggcatttcattgacgcacaac
aaagatggcaagcaggttcgattttcttgggctcggaatcgtctctttgaccgcatgaca
gttgtgattttgtatgagaggtgccttgctgccaaaaaggcaaaagtcacaaaggtgcaa
gagaaaccaacccgaaagttcaagccactacctctcaccaccgtcgagctccaaaaagcg
gcaactcgcttgctgcgaatgtctggccagcaggccatgacgattgccgaaggcctatac
aacaaaggattcatcagctatccgaggacagaaaccgaccgcttcgataaaggcatgaac
ctgagggctcttgtccagaaacaggcgacggatcagcgctggggcacgtatgctcagggt
ctcgtcaacgggggctttcgacaaccgagagagggaaaacatgacgacaaagctcaccct
ccgatccatcccatcgcgcatgtggcaccaagcgcgttatcctatgatgagggacggctc
tatgagtatgtggtgcgccgcttcttggcatgctgttcggaagacgctcaaggaatggcg
acggatattgacgtccagttcggggacgaacggttcagtacacgaggggttattgtgctc
gaaagaaactacttggatgtctacatctacgaaaactggaccaataccacagagctgccg
cgattcaccgtcggtgagcagttcgagcccaccgaagcaatgatgacggaaggcaaaaca
tcaccgccaaactatctcacagaggcggatctgattgctctcatggatgccaacggcatt
gggacggatgccacaatggctgagcacatccaaaagattcaagatcgagaatacgtggca
actacaacgagaggaggcacgacggccgcagatggtgacgatgaagagcatgacgaggca
ccggctgctcgaggcggacgtggacgtggacgtggaagaggtggccgaggtcgaggaggc
ggcggctcaacgagagggggcagtggcagcggcatcaaggtcttcgtcccaactcaactt
ggagtggcccttattctgggcttcgaccggatgagcttcgaaacgagccttggaaagccc
tttttgcgcaaagaaatggagcttcagatgaaggccatttgccaaggcagcaccacacgc
cgggaggttcttgaccgaagcatagcgcagtacaaacaggtgtttctgcagtcccaagaa
caagtaggagtccttaagcaggcctgccgcgagtttatctttggccaagggccgagagca
tag
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integrated database retrieval system
