Trichoderma reesei RUT C-30: M419DRAFT_75046
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Entry
M419DRAFT_75046 CDS
T06031
Name
(GenBank) ATP-dependent RNA helicase dbp9
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
trr
Trichoderma reesei RUT C-30
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trr03009
]
M419DRAFT_75046
Enzymes [BR:
trr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M419DRAFT_75046
Ribosome biogenesis [BR:
trr03009
]
Eukaryotic type
Pre-60S particles
Helicases
M419DRAFT_75046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
ETS03678
JGI:
TrireRUTC30_1_75046
UniProt:
A0A024SF05
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MKRKLNQNDVPTSAKPDADQQMADAEAATTTTEPTATTTTTTTTTAPTTGAASDEDKTFA
DLGLDARLVQAVAQQKFLKPTLVQRRAIPLALDGKDVLCKAKTGSGKTAAYVLPVLAGIL
KKKSVDPTPATTALILVPTRELADQVFKSIELFSAFCAKDVRAVKLTDKLTDAVQRSLLS
TCPDIVISTPARAWHNVNGNSGALSLDKLAYLVLDEADLLLSYGYSEDLESLSFSLPKGI
QTIMMSATLTTEVDSLKKIFYRDQQPTLLDLEEPDAEGEGVTQLVTKCGEDEKFLLIYVI
FKLQLVKGKCIIFVADIDRCYRLKLYFEQFGIRSCILNSELPVNSRIHVVEEFNRNAYDI
IIASDEKEVLGNEEKAEEEQEDEAMDDGEVKEGGRPKKKRKAAKGDVEYGVSRGIDFKNV
AAVINFDLPTSASSYTHRIGRTARAGRAGMALSFVVPKDLYRKHIHTSTPSAENDEKILA
RITKQQAKKGKELKPYNFNKEQVEAFRYRMNDALRAVTKVAIREARTRELRQELLKSEKL
KRYFEENPSEMNHLRHDGELRTARQQAHLKHVPDYLLPKEGRQALTAGDVGFVPMKRFDR
RAGTKRKGGKKSGKAGVRKGDPLKTFKARRKTK
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcaagctcaaccagaatgacgtgccaacctcggccaaacccgacgcagaccag
cagatggccgacgctgaagcagcaaccaccaccacagagccgacagcgacgacgacgaca
acaacgacaacaacggcgccgacgacgggagcggcctctgatgaggacaagacatttgcg
gaccttgggctcgatgccaggctggtgcaggccgtggcacagcaaaagttcttgaagccg
acgctcgtgcagcgcagggcgattccgctggcgctcgacggcaaggacgtgctgtgcaag
gcgaagacggggtcgggcaagacggcggcatatgtgctgcctgtgctggccgggattctg
aagaagaagagtgttgatcctactcctgccacgacggctctgatattggttccgacgcga
gagcttgccgaccaggtcttcaagtcgatcgagctcttctccgccttttgcgcaaaggat
gtccgcgccgtgaagctgacggacaagctcaccgacgcggtgcagcgctctctgctgtcg
acgtgcccggacattgtcatctcgacgcccgcccgcgcgtggcacaatgtcaatggcaac
tcgggtgcgctgtcactggataagctggcgtacctggtcctggacgaggcggatctgctt
ctgtcgtacggatatagcgaggatctcgagagcttgtcgttttctttgcccaagggcatt
cagaccatcatgatgagtgctacgttgaccactgaggtggattccttgaagaagattttc
taccgcgaccagcagcccacgctgttggatctggaggagccggatgccgagggcgagggt
gtgacgcagctggtgaccaagtgtggtgaagacgaaaagttcctgctcatctacgtcatc
ttcaagctgcagcttgtcaagggcaagtgcatcatcttcgtcgccgacattgaccgctgc
taccgcctgaagctctactttgagcagtttggcatccgaagctgcatcttgaactcggag
ctgcccgtcaactcgcgaatccacgtggtcgaggagttcaaccgcaacgcctacgacatc
atcattgcctctgacgagaaggaggttctcggtaacgaggagaaggccgaggaggagcag
gaggatgaggcaatggacgacggcgaagtaaaggagggcggtcgaccgaagaagaagcgg
aaggctgccaagggtgacgtggagtatggtgtctctcgaggcattgacttcaaaaacgtt
gcggccgtcatcaactttgaccttcccacatctgcgtcttcctacacacacaggataggt
cgcacggcgcgagccggacgagcgggcatggcgctgtcgtttgtcgtccccaaagatctc
taccgcaagcacatccacacgtccactcccagcgcggagaacgacgagaagatcctggcg
agaatcacaaagcaacaggccaagaagggcaaggagctcaagccgtacaacttcaacaag
gagcaggtggaggctttcagataccgcatgaacgacgcgctgcgtgcggtgaccaaggtg
gcgattcgagaggcgcggacaagggagctgcgtcaggagctgctgaagagcgagaagctc
aagaggtactttgaagagaacccctcggagatgaatcacctccggcacgacggcgagctg
aggacagcccggcagcaggcgcatctgaagcacgtgccggactacctgctgcccaaggaa
gggcggcaggccctgacggcgggcgacgttgggttcgtgccgatgaagaggtttgaccgg
cgggcggggacgaagcggaaggggggcaagaagagcggcaaggccggggtgcgcaaggga
gatccgttgaagacgtttaaggcgaggcggaagacgaagtga
DBGET
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