Trichoderma reesei RUT C-30: M419DRAFT_76238
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Entry
M419DRAFT_76238 CDS
T06031
Name
(GenBank) pre-mRNA splicing factor slt11
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
M419DRAFT_76238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trr03041
]
M419DRAFT_76238
Spliceosome [BR:
trr03041
]
Complex B
Other components
Prp19-related factors
M419DRAFT_76238
Complex C
M419DRAFT_76238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
RRM_YTH1
RRM_occluded
Nup35_RRM_2
RRM_3
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ETS03320
JGI:
TrireRUTC30_1_76238
UniProt:
A0A024SDA6
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MPPQIKQDLNRSGWETTDFPSVCENCLPENPYVKMLKEDYGAECKLCTRPFTVFSWAAER
AQGRKRRTNVCLTCARLKNCCQSCMLDLSFGLPINVRDTALKMIAPGPTSDINREYFAQN
NEKLIEEGKAGTEEYEKTDDKARELLRRLANSKPYFRKGRTVDESELAGARAGGNPAVGA
GVGGPGPIRTRDSRAAAAAGARPGGRGRGRPAFPSAAQLPPSPKDWLPPDDPNIMSLFVT
GVEDDLPEHKIRDFFKVHGKIKSLVCSHMSHCAFVNYETREAAEKAAAACQGRAVIAGCP
LRIRWGQPKAIGTMDREQRYQMLQDARIRQNRPQQQRALEAGQQPTAATRAVAAAPPPGA
EDTPNYASLAGE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccagatcaagcaagacctcaaccggtcaggatgggagacgaccgactttccc
tccgtctgcgaaaactgcctgcccgagaacccatacgtcaagatgctcaaggaagactac
ggcgccgagtgcaaattgtgtacgcgaccgtttaccgtcttcagctgggctgctgagcgc
gcacagggccgcaagagacggaccaatgtgtgcctgacgtgcgctcgcctcaagaactgc
tgccagagctgcatgctggatctcagcttcgggctgcccatcaacgtccgcgataccgca
ctcaagatgattgccccaggcccgacgtccgacatcaaccgagagtactttgcgcagaac
aacgagaagctcattgaggagggcaaggcgggaactgaagagtacgagaagacggacgat
aaggcccgcgaacttttgcgacgccttgccaacagcaagccctactttcgcaagggcaga
accgtggacgagtcagaactggccggtgcccgagctggcgggaaccctgcagtaggggct
ggcgttggaggcccaggtccgatccgaactcgagactcgagagctgcagccgctgcaggc
gcgcggcctggcggtcgagggcgaggccggccggcattccccagcgcagcacagctgccc
ccgagcccaaaggactggctaccaccggatgaccccaacatcatgtctcttttcgtcacg
ggtgtcgaggacgacctgcccgagcacaagattcgcgacttcttcaaggtccacggcaag
atcaagagcctggtgtgctcccacatgtcccactgcgcgtttgtcaactacgagacgagg
gaggccgccgagaaggcagcggccgcatgccagggcagggcggtgattgctggatgcccg
ctgaggattcgctggggacagccaaaggccattggaaccatggaccgtgagcagcgctat
cagatgctgcaggatgcccgcatccgccagaacaggccgcagcagcagcgggccttggaa
gcgggccagcagccaaccgcggcgactcgcgcagttgctgcggcgccgcctcccggagcg
gaagacacgcctaactatgccagcctggctggagagtaa
DBGET
integrated database retrieval system