Trichoderma reesei RUT C-30: M419DRAFT_78255
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Entry
M419DRAFT_78255 CDS
T06031
Name
(GenBank) mRNA 3'-end-processing protein RNA14
KO
K14408
cleavage stimulation factor subunit 3
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
M419DRAFT_78255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_78255
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
M419DRAFT_78255
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_14
UTP6_C
Motif
Other DBs
NCBI-ProteinID:
ETS02385
JGI:
TrireRUTC30_1_78255
UniProt:
A0A024SAN9
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MASEETSWGNEGFAAAEGDHTQHSDEQVDNFAQDSHVSGESADNGTEDGGDYDPEYVPDE
SVVPDPPVPEKAAPAVPSQRPASSKPKMSGGFLVEASDDEDEDDDEGGNAAGPGQREPSA
SQSQAGQPTEAKASSASVPPVPTNVPSNVTATPVASLNPVTLLEARIKEDPRGDMDAWLN
LIADHKRNSRLDDLRKVYNRFLEVFPQSADVWVEWIEMELGMDNFVDAEQLFGRCLMSVP
NVKLWTVYLNYIRRRNDLNNDPTGQARRTITQSYEFVIDNIGVDRDSGNIWQDYIQFIKS
GPGQIGGTGWQDQQKMDQLRKAYHRAITVPMSTVNNLWKEYDQFEMGLNKVTGRKFIQER
SPGYMSAKSGNIALDNITRDLKRTNLPRLPPAPGFEGDQEFRHQVALWKKWIEWEKEDPL
VLKADEPKVFAQRVLYCYKQALMALRFWPELWVDAAEWCLQSDIAEVDKEMGVEFLIQGI
AANPESVLLALKHADHIEATSPLREGDKAEYAKAVRKPFDDVLNRLYALGDKAKEREKLE
ISTLKQAAAQEAPLQQSIEQNYDDDYEDGASKKTSVEERIAAIQKGYAAETNILSRTISY
VWIAMARAIRRIQGKGNQTDGGLRKVFTDARQKGRLTSDVYVAVALLESVVYKDPVGAKI
FERGARLFPNDEGFIVEYLKFLHSKDDTTNARVVFETCVNRLIANPETLHKAKPLYAYFH
KYESQYGELSQIHKLEARMAELFPEDPKLKNFAARYSSDKFDPIAAPVIISKAAQMRPKL
AAPLIEQPASSRNSFPPQREQSPRPQYVRATASPKRPLGPDDEELNPPKRLARGASPLKG
AAGRRLDQQRRNQSSALHRDITFLLGILPPAHTYDSQRLNAAAMVSLLRDTPLPDYATWK
AQTGGQYRFTAPVHGRQASGDFSRPISPYGRIAPASNVYRQSPLRTEAGSAFPTAPYGGT
DANAAPSQWPPAPTGGYNAPAPGQYGGYRFQ
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgaagaaacttcgtggggcaatgaaggatttgcggccgcggaaggcgatcat
actcagcatagcgacgaacaagttgataactttgctcaagactcccatgtgtcaggtgaa
tcagcggataatggaaccgaggatggaggggattatgatcccgaatatgtccccgatgaa
tcagttgtcccagaccctccagtccctgaaaaagccgcccccgctgtcccttcgcaacgt
cctgcatcatccaagccaaaaatgtcgggcggcttcttagtggaagcctccgacgacgaa
gacgaagacgacgacgaaggaggcaatgcagcaggccctggccagcgcgagccctcggca
tcgcagagccaagccggtcagcccaccgaggccaaggcctcaagtgcctcagtccctcct
gttcccaccaatgtcccttccaatgtgactgcaacaccagtggctagcctgaatccggta
acgttgctcgaggctcgcattaaggaggatcctcgaggggacatggatgcgtggctcaat
ctcattgccgaccataagcgcaacagcaggctggacgaccttcgcaaggtttacaaccgg
ttcctggaggtctttccccaatcggctgacgtgtgggtcgaatggatcgaaatggaactc
ggcatggacaatttcgtcgatgctgaacagctctttgggcgatgcttgatgtcggtcccc
aacgtcaaactgtggactgtctacctcaactacatccgccgacggaacgatctcaacaac
gatcctaccggccaagccaggaggaccatcacgcaatcatacgagttcgtgattgataac
attggcgtggatcgggactcgggcaacatctggcaggactacatccagttcatcaagagc
ggccctggccagattgggggcaccggttggcaagaccagcaaaagatggaccagctgcgc
aaagcctaccaccgcgcgataaccgttcccatgtccacagtgaacaatctgtggaaggag
tacgaccaatttgagatggggctcaacaaggtgacgggacgcaaatttatccaggagcga
tctcctggatacatgtctgccaagagcggtaacatcgccttggataacattacccgagac
ttgaagcgcacgaatcttccccggctgccgccggctccaggattcgaaggcgaccaggag
tttcggcaccaggtggccctgtggaagaaatggatcgagtgggagaaggaagatccgctg
gtgctcaaggcggacgagccaaaagtattcgcacagcgggtcctgtactgctacaagcag
gccctcatggccctgcgcttctggccagaactatgggttgatgcagccgaatggtgcctt
caaagcgacattgccgaggtcgacaaggagatgggcgtcgagttcctaattcaaggaatc
gccgccaacccagagagcgtcctgcttgctttgaagcacgcagaccacatcgaagccact
tcgccgctcagggagggagacaaggctgaatacgccaaggccgtgaggaaacctttcgac
gatgttttgaacaggctgtatgcactgggagacaaggcgaaggagcgggagaagctggag
atatccactctaaagcaggcggcggcacaggaggctcccctgcagcagtccatcgagcaa
aactacgacgacgactacgaagatggagcttcgaagaagacttctgtcgaggaacgtatt
gctgctattcaaaagggctacgctgccgagaccaacatcctttctcgcacaatttcgtac
gtgtggattgccatggccagggcgatccgtcgtatccagggaaaaggcaaccagacagat
ggtggactgcgcaaagtcttcaccgatgctcggcaaaagggacgcctcaccagcgacgtg
tatgttgccgttgccttactggagtctgttgtgtacaaggacccagtcggtgccaagatt
tttgagcgtggagcccgcctgtttcccaatgacgaaggctttatcgtcgagtatctgaag
tttttgcattccaaggacgatacaacgaatgctcgggtggttttcgagacttgtgttaac
cgccttatcgccaatccagagacacttcacaaagccaaacctctatacgcgtacttccac
aagtacgagtcccaatacggcgaactatcccagatccacaaactcgaggcgaggatggca
gagctgttccctgaagacccgaagctcaagaactttgcggctcgctactcgtctgacaaa
ttcgatccgattgccgcccccgtgatcatttcgaaagctgcccaaatgcgacccaagctt
gctgcccccctcattgaacagcctgcatcatcccgcaacagcttccccccacagagagag
cagagcccccgaccacagtacgtcagagccactgcgtctccgaaacggccccttggccca
gatgacgaggagctcaaccccccaaagaggctcgctagaggcgcctctcctctcaagggg
gcagctggccgacgacttgaccagcagcgccgcaatcaatcatcagccctccatcgggac
attacgttcctcctgggcatcttgcctcccgcccacacatatgactcgcagcgactgaac
gcagctgccatggtctcactcctccgggacacgccacttcccgattacgctacctggaaa
gcacagaccggagggcaatatcggtttaccgcccccgtccatggtcgacaagcttcgggg
gacttttcccggccaatcagtccatatggacgaatcgcccctgcttctaacgtctataga
caatcgcctcttcgaacagaagctggaagtgcgtttcccacggccccatacggggggact
gatgcgaatgcggctccgagtcaatggccgccagcgccgacgggaggatacaacgcgccg
gcgcctggtcagtatggaggatatcgctttcagtag
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