Trichoderma reesei RUT C-30: M419DRAFT_7928
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Entry
M419DRAFT_7928 CDS
T06031
Name
(GenBank) Rad4-domain-containing protein
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M419DRAFT_7928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_7928
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
M419DRAFT_7928
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rad4
BHD_3
BHD_1
BHD_2
Transglut_core
Motif
Other DBs
NCBI-ProteinID:
ETS02273
JGI:
TrireRUTC30_1_7928
UniProt:
A0A024SB30
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MVGRKRNTPQRGARQQANRGGGGNEPDIYQQMLAEAGVSAPAVSSPERPLKRRRGVASSP
DRAVSEKAEPAVLSSLSSSVGEASRSKTEKPGDGDEEAEEDDDEMEFEDVAIPEPTLQTL
ELDSDDDEEDEDEALQFEDVQFNMPLPDEASQSQEPQELELNLSAQKSAMTSKQGADRRK
PLKKEEKERRIDIHKTHLLCLLTHVAKRNHWCNDAQVQESLRPHLTDKMVQYLTPGTNLS
QFGRTESLKNGLKLVADMWKNKFEITERGMRRALWAEKVEDLDSYELPDDMESCLDKSDF
RQAAKTLQGSRDVGAQLYCALLRSIGVRARLVCSLQPLSFGSAGPTLPKAKATTTKSKSA
TKAEHMLSQVARYREMAAAVSTTSGAGPSTARRRLGHPNATDYRFEPTAAPSRPRPTFAS
PKKIRESPYPIYWVEILDVGHQKWQPTDPVVTHTFWKPRVFEPPITDQENCLCYVVAFNE
DGTAKDVTRRYAKGYTAKTRRLRIETAVDDGKKWWRKVMKTFQPAVVDDLDQIEDIELAS
VEAREPMPRNVQDFKGHPVYALERHLRRHEVLAPGAVPSGTVSAGARAPLEKVFRRKDVR
IARSAEKWFRLGREVKPLEIPAKWLPKRVQKRRFGRDEEAEQESNEGDAGIPIYTSDQTE
LYEPPPVRNGRVPKNKFGNIEVYVPSMVPKGGVHIASEYARRAAYLLGIDCAPALTGFQF
KGRQGTAVLNGVVVAKEYEEAVRAVIQGMVDLEQEMEDDKRRYVALKLWRRFLVGLRIRE
RIWSGVGEDERKEADRQAELEAELGGAESDETEEFDMVVDDDDEGGGGFLVE
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggtcggaaggaagcgcaacactccgcagaggggcgctcggcaacaggcgaatcgcggc
ggcggcggcaatgagcccgacatctatcagcagatgctggctgaggccggggtctctgcg
ccggctgtgagctcaccggagaggccgctgaagaggagacgcggagttgcttcgtcgccg
gatcgggctgtatcagagaaagctgagccggctgtattatcatcattatcatcatcggtg
ggagaggcatcgagatcgaagactgaaaagccgggtgacggcgatgaggaagcagaagag
gatgatgatgagatggaatttgaagacgtcgccatccccgaacctactcttcaaaccctt
gagcttgattcagacgacgatgaagaagatgaggacgaggcgcttcaattcgaagacgtg
cagttcaacatgcccttaccggatgaagcctcacaatcacaagagccacaggaacttgaa
ctcaatctctcggcacaaaaatctgccatgacgtcaaaacaaggggcagaccgacgaaag
ccactcaaaaaggaagaaaaggaacgccgcattgacatccacaagacacatctactctgt
ctattgactcacgtggccaagcgcaaccattggtgcaatgacgcgcaagtccaagagtcc
cttcggcctcacctgacggataagatggttcaatatctgacccctgggacaaacctttcg
cagtttggaaggaccgagagcctcaagaacgggctgaagcttgtcgcagacatgtggaag
aacaagtttgagattacagagcgcggcatgaggagagctctgtgggcggaaaaggtagag
gatcttgatagctatgaactcccggatgacatggaatcatgtctggataaatctgacttt
agacaagcagcgaagacgctgcaaggctcacgcgatgtcggagcccagttgtactgcgcc
ctgctacgaagcattggtgttcgtgcgcggctcgtgtgttcattacagccgctctcgttt
ggctctgcagggcctacccttccaaaggctaaagcaaccaccaccaagtccaaatcggct
accaaggccgaacacatgctatcccaggtagcgagatatagagaaatggcggctgccgtc
tcaacgacctctggcgcgggaccttcgactgctaggcgcagattaggccacccaaacgca
acggattacaggtttgagcccacggctgctcccagcaggcctcgcccgacctttgcgtcc
cccaagaagatacgagagtccccttacccaatatactgggtggaaatcctcgatgttggg
catcagaaatggcagcccacggaccccgtggtaacgcacaccttttggaagcccagagtg
tttgagccgccgatcacagatcaagaaaactgcttatgctacgttgtggcattcaatgaa
gatggcactgcaaaggatgtcacccgacggtatgccaagggttatacggcaaagacacga
agacttcgcatagagactgctgtggacgacggcaagaagtggtggcgcaaagtcatgaag
acgttccagcctgcagtggttgatgacctggatcagatcgaggacattgagcttgccagc
gttgaggcgagagagcccatgccaaggaacgtgcaggattttaaaggccatcctgtatat
gccttggagcgccacctccgtcgacatgaggtcctcgctcccggggccgtaccgtccgga
acggtttcagctggagcccgagctcccttggaaaaggtgttccgacgcaaagacgtccga
attgcgaggagtgccgagaagtggtttcgtctcggtcgtgaagtcaagcctctagagatt
cccgcgaaatggctgcccaaaagagtgcagaagagaagatttgggcgcgacgaggaagct
gaacaagagtcaaacgagggcgatgcggggattccaatatacacgtcggatcagacggag
ctatatgagccgcctccggtacgaaacggacgcgtgccgaagaacaagtttggcaacatt
gaggtgtatgtgcccagcatggtgccgaaaggtggcgtccacatagcgagcgagtatgcg
aggcgtgcggcgtacctactggggattgactgcgcaccggcactcacgggatttcagttc
aagggacgacagggcacggctgtgttgaacggggttgtcgttgcaaaggagtacgaggag
gccgttcgcgcggtgatccaaggcatggtcgacctggagcaagagatggaggatgacaag
aggcggtatgtggctctgaagctctggcggcgtttcctcgtgggcttgagaattcgggag
aggatttggagcggcgtcggcgaggacgagaggaaggaggcggatagacaggctgagcta
gaagccgagctaggaggtgccgagagcgacgagacggaggagtttgatatggtggttgat
gatgacgacgaagggggcgggggattcttggtggagtag
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