Trichoderma reesei RUT C-30: M419DRAFT_8232
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Entry
M419DRAFT_8232 CDS
T06031
Name
(GenBank) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
M419DRAFT_8232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_8232
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
M419DRAFT_8232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
Clusterin
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ETS02600
JGI:
TrireRUTC30_1_8232
UniProt:
A0A024SB64
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MPTLTAEKDGTNQLMHVREQQQMLHLELVDDEGGFIRFFKSLPDIGDDAVRIFDRGDWYT
AHGSDAMFIAKTVYKTTSVVRQLGKNDHTGLPSVTISTTVFRQFLREALFKLGKRVEIWQ
SPSGRMNWKCVKQASPGNLQDVEDELGGQIDSAPMIMAIKISAKASEARAVGVCFADASV
RELGVSEFLDNDLYSNLESLIIQLGVRECLIQYEKGDREKEKDPELAKIRQIINNCGVAL
AERPAGDFGIKDIEQDLARLLKDEKSVAMLPQTDLKLAMGSAACLIKYIGALQDASNFGQ
YQLYQHDLAHYMKLDAAALKALNLMPGPRDGSKTMSIYGVLNHCKTPVGSRLLAQWLKQP
LMSKDEIEKRQQLVEAFFTDTELRQTMQEEHLRSVPDLYRLSKKFQRGKANLEDVVRAYQ
VVIRLPGFIGTLEGVMDEAYKDPLDDAYTNKLRELSDSLGKLQEMVEQTVDLDALDRHEY
IIKPEYDQSLRIIRKKLDQLDRDIRQEFNNAARDLDQEADKKIFLEANHKVHGVCMRLTR
QEAGCIRGKSKYLECSTQKNGVYFTTKQLQAYRREHDQLSQNYNRTQSSLVNEVVQVASS
YCPVLERLAGVLAHLDVIVSLSHAAVHAPEAYVRPKIHPRGEGQTKLTAARHPCMELQDD
VQFITNDVELTRDKSSFLIITGPNMGGKSTYIRQAGVIALMAQVGSFVPCSEAELTIFDS
ILARVGASDSQLKGVSTFMAEMLETANILKSATAESLIIIDELGRGTSTYDGFGLAWAIS
EHIVKEIGCFAMFATHFHELTALADQYPQVKNMHVTAHISGTNSGGDDVNAKREVTLLYK
VEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELEDFTTKHEDLGVSYSTEDVEQGSAM
LKKVLVEWKDAVRNGGLVSKEEQVAKLKELVAADEKLLANPFFQSVKAL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgccaacactgacagccgaaaaggatggcacaaaccagctgatgcatgttcgagagcaa
cagcagatgcttcacctggagctggtcgacgacgagggcggcttcatccgcttcttcaag
tctctcccagacatcggcgacgatgccgtgcggatattcgacagaggcgactggtacacc
gcccacggaagcgatgccatgttcattgccaaaacagtctacaaaacgacgtccgttgtc
cgacaactcggcaagaatgaccacacgggtctcccctccgtcacgatatccaccaccgtc
tttcggcagttcctccgcgaggccctcttcaagctgggcaagagagtcgagatctggcag
agtccgagcggtcgcatgaattggaagtgcgtcaagcaggcatccccgggaaacctgcaa
gatgtggaagacgagcttggtggccagatcgactcggcacccatgatcatggctatcaag
atatccgcaaaggcttccgaggcacgggccgtcggtgtctgctttgctgacgccagcgtt
cgagagcttggtgtcagtgagttcctcgacaatgacctctactcgaacctggagtctctc
atcatccagctgggtgtccgagagtgccttattcagtacgagaagggcgacagagagaag
gaaaaggaccctgaattggcaaagattagacaaatcatcaacaactgtggtgtcgctctg
gccgagcgccctgctggtgactttggcatcaaggatatcgaacaagacctggctcgcctg
ttgaaggacgaaaagtcagttgccatgctgccccagacggaccttaagctggccatgggc
tcggcagcatgcctgatcaagtacatcggcgccctacaggatgcctccaactttggccaa
tatcagctctatcagcacgacttggctcactacatgaagctcgacgctgccgctctcaaa
gccctcaatctcatgccgggcccgcgagacggctccaagacgatgagcatctacggcgtg
ctcaaccactgcaagacccccgtgggcagccgtcttttggcgcagtggctgaagcagccg
ttgatgagcaaggatgagattgaaaagaggcaacagctcgttgaggctttcttcaccgac
accgagcttcggcagaccatgcaggaagagcacctaagatctgtccccgacctgtaccgc
ctgtcgaagaagttccaacgcggtaaagccaacctggaggatgtcgtccgcgcctatcag
gttgtcatccgcctgccgggcttcatcggcaccttggagggagtcatggacgaggcgtat
aaagatcccctggacgatgcttacaccaacaagctccgcgagctgtccgatagtctcggc
aaactccaggagatggtggagcagaccgtggacctcgatgccctggaccggcacgagtac
atcatcaagccagagtacgatcagagcttgcgaatcatccgtaagaagcttgatcagctc
gatcgcgatatcaggcaagagttcaacaacgccgcacgcgacctcgaccaagaggccgac
aagaagatctttctcgaagcaaatcacaaggttcatggtgtgtgcatgcgtctgacacgg
caagaggctggctgcatccgtggcaagtcaaagtatctggaatgctcaacccagaagaac
ggcgtctactttaccacaaagcagctgcaggcctaccgccgtgagcacgaccagctctcg
cagaactacaaccgcacccagagcagcctggtgaacgaggtcgtccaggtagcgtcctcg
tattgcccagtcctggagcgccttgccggcgtgctggctcacctagacgtcatcgtctcg
ctctcccacgccgcggtgcacgcccctgaagcctacgtccgacccaagattcatccccgc
ggtgaaggccagaccaagctcaccgcggctcgccacccctgcatggagctccaggacgac
gtccagttcatcaccaacgacgtggagctcacgcgggacaagtcctcgttcctcatcatc
accggacccaacatgggcggcaaatcgacctacattcgccaagcgggcgtcattgccctc
atggcccaggtcggctctttcgtgccctgctccgaggccgagctcaccatctttgactcc
atcctcgcccgcgtcggcgcttcggattcgcagctcaagggcgtctcgaccttcatggcg
gagatgctcgaaacggccaacatcctcaagtccgccacggccgagtcgctcatcatcatc
gacgagctcggccgcggcacctcgacctacgacggcttcggcctggcctgggccatatcc
gagcacattgtcaaggaaattggctgcttcgccatgttcgcaacgcacttccacgagctc
accgccctggccgaccagtacccgcaggtcaagaacatgcacgtcacggcgcacatcagc
ggcaccaacagcggcggcgacgacgtcaacgccaagcgcgaggtgacgctgctgtacaag
gtcgagcccggcatctgcgaccagagcttcggcatccacgtcgccgagctcgtgcgcttc
ccggacaaggtcgtccgcatggccaagcgcaaggcggacgagctcgaggactttacgacc
aagcacgaggacctcggcgtgagctacagcaccgaggacgtcgagcaggggagcgccatg
ctcaagaaggtgctcgtcgagtggaaggacgcggtgaggaacggggggcttgtgagcaag
gaggagcaggtggccaagctgaaggagttggtggccgcggatgagaagctgcttgccaat
ccgttctttcaatctgtcaaggcgctctga
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