KEGG   Trichoderma reesei RUT C-30: M419DRAFT_84846
Entry
M419DRAFT_84846   CDS       T06031                                 
Name
(GenBank) exoribonuclease family protein
  KO
K12586  exosome complex component RRP43
Organism
trr  Trichoderma reesei RUT C-30
Pathway
trr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:trr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    M419DRAFT_84846
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:trr03019]
    M419DRAFT_84846
Messenger RNA biogenesis [BR:trr03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     M419DRAFT_84846
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-ProteinID: ETS00063
JGI: TrireRUTC30_1_84846
UniProt: A0A024S4Q1
LinkDB
Position
Unknown
AA seq 336 aa
MAAEAGLSRSTFAKLSPHPYLLANLEPSSDSAAPTRSNGRAPFEVRKPTVNLSSLSHAHG
SALVRTGDTTVICGIRGETILTEHIPNYRASNIQTELSDYDLLVPNIELATGSAPQFLPG
GPPTTLAQTLSTRIYSLLHSSKLLRAEDLRIWHKRAADVPVPADEEEVMEESDGEKYVAA
YWVLYIDIFFISFDGNPFDAAWAATVAALRDTKLPQARYDPDREMILCSRKDPRPLTVAS
IPIACTAVIFTGKETKDQAPDGKFWLLADPDTLEESLCNETVTIVVDCAGGSRRILSISK
HGGTAMTAKLLGSKDFLDWASKRWEDFASAITGTRL
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggcagccgaagcgggcctttctcgctctacctttgccaagctctctcctcatccatat
ctcctcgcaaacctcgaaccctccagcgactctgctgcgccgacacgaagcaatggccga
gcaccgttcgaagtccgaaaaccgacggtgaacctgtcaagtctctcacacgcccacgga
agcgctctggtgcgcacgggagacaccaccgtcatctgcggcatccggggcgaaaccatc
ctgacggagcacatccccaactatcgcgcatccaacatacagacagaactatccgactac
gacctactggttccaaatatcgagttggccactgggtccgcaccacagttcttacccggc
ggtccgcccacgacgctcgctcaaacgctgagcaccagaatctactctctcctacacagc
tccaagctgctgcgcgccgaggacttgcggatatggcataaacgagcggccgacgttccg
gttccagctgatgaagaggaggttatggaggaaagtgatggggagaaatacgtggccgcc
tactgggtgctttatatcgacatcttcttcatctcctttgacggcaacccgtttgatgcg
gcttgggctgctacggtggccgctctgcgcgacaccaagctgccgcaagctcgctacgac
cccgaccgagagatgatcttgtgctccaggaaagaccccagacctctcacggtggcaagc
ataccgattgcctgcacggcagtcatcttcacaggcaaggagacgaaagaccaggctccg
gatggcaagttctggctgctggcagacccagataccctcgaggagtcattatgcaacgag
acggtcacaattgtcgtcgactgcgcaggaggctcaagaaggatcctctccatctcaaag
cacggaggcacggccatgacggcgaagctactcgggtcgaaggactttctcgactgggcg
agtaagcggtgggaggattttgcatcagcaatcactggcacccggctttga

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