Trichoderma reesei RUT C-30: M419DRAFT_84846
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Entry
M419DRAFT_84846 CDS
T06031
Name
(GenBank) exoribonuclease family protein
KO
K12586
exosome complex component RRP43
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M419DRAFT_84846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_84846
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
M419DRAFT_84846
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ETS00063
JGI:
TrireRUTC30_1_84846
UniProt:
A0A024S4Q1
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MAAEAGLSRSTFAKLSPHPYLLANLEPSSDSAAPTRSNGRAPFEVRKPTVNLSSLSHAHG
SALVRTGDTTVICGIRGETILTEHIPNYRASNIQTELSDYDLLVPNIELATGSAPQFLPG
GPPTTLAQTLSTRIYSLLHSSKLLRAEDLRIWHKRAADVPVPADEEEVMEESDGEKYVAA
YWVLYIDIFFISFDGNPFDAAWAATVAALRDTKLPQARYDPDREMILCSRKDPRPLTVAS
IPIACTAVIFTGKETKDQAPDGKFWLLADPDTLEESLCNETVTIVVDCAGGSRRILSISK
HGGTAMTAKLLGSKDFLDWASKRWEDFASAITGTRL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgaagcgggcctttctcgctctacctttgccaagctctctcctcatccatat
ctcctcgcaaacctcgaaccctccagcgactctgctgcgccgacacgaagcaatggccga
gcaccgttcgaagtccgaaaaccgacggtgaacctgtcaagtctctcacacgcccacgga
agcgctctggtgcgcacgggagacaccaccgtcatctgcggcatccggggcgaaaccatc
ctgacggagcacatccccaactatcgcgcatccaacatacagacagaactatccgactac
gacctactggttccaaatatcgagttggccactgggtccgcaccacagttcttacccggc
ggtccgcccacgacgctcgctcaaacgctgagcaccagaatctactctctcctacacagc
tccaagctgctgcgcgccgaggacttgcggatatggcataaacgagcggccgacgttccg
gttccagctgatgaagaggaggttatggaggaaagtgatggggagaaatacgtggccgcc
tactgggtgctttatatcgacatcttcttcatctcctttgacggcaacccgtttgatgcg
gcttgggctgctacggtggccgctctgcgcgacaccaagctgccgcaagctcgctacgac
cccgaccgagagatgatcttgtgctccaggaaagaccccagacctctcacggtggcaagc
ataccgattgcctgcacggcagtcatcttcacaggcaaggagacgaaagaccaggctccg
gatggcaagttctggctgctggcagacccagataccctcgaggagtcattatgcaacgag
acggtcacaattgtcgtcgactgcgcaggaggctcaagaaggatcctctccatctcaaag
cacggaggcacggccatgacggcgaagctactcgggtcgaaggactttctcgactgggcg
agtaagcggtgggaggattttgcatcagcaatcactggcacccggctttga
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