Trichoderma reesei RUT C-30: M419DRAFT_88258
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Entry
M419DRAFT_88258 CDS
T06031
Name
(GenBank) nucleoporin Nup157/170
KO
K14312
nuclear pore complex protein Nup155
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
M419DRAFT_88258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_88258
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
M419DRAFT_88258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
Motif
Other DBs
NCBI-ProteinID:
ETR98624
JGI:
TrireRUTC30_1_88258
UniProt:
A0A024RZQ0
LinkDB
All DBs
Position
Unknown
AA seq
1412 aa
AA seq
DB search
MSFPPATPLRPVPGAFVNTPAVVSRYQTSSHDPVRRTLFSSEAQNPQTAVATTAAAHGTV
ATTASTAVTAAASNAEGAGLASLTPMPPPRVENMPPVLKAAKAINTFLQSDENFPDLDSY
CRQGASSDYELPGADSAWAPFQKTNMYPIPNQVFDHYNSGQLQTLMGLFAEINHAWVVID
NSLFLWDYTHSDPELIGFEDQPHTIHAVALVPPKPGIFVSTITHILVVATSSEIILLGLS
AADTSAGTKTVTLYQTKMVLPTRGSDIRVISGSADGRIFFGGCSDTDINELYYQSEEKWF
SSRCGKVNHSNPGWSSVVSLQAGLWPQRDPEHLVDIVIDDTRKLVYTLSSASTIRTYHME
TPERLNKVIEKTKIHCLRDIAHMITQSKLLTDRTNIVSISPISKQEASKLHLMALTDTGC
RLFFSATNASSYLYGSQANLAPQSMQVQFIKFPPSAIARRSTQIGLNGQPSGEAVVDLDS
TMLISSRQGARFPPGFFLDFVTRKEDPNCDSLFVAGPETGRIKRVSPNTPLRYFEQASWI
DIGSRAEAVGLITQPFAAASQPIGFGNELAVQFDEPPSEFAVLTNTGVHVIRRRRLVDTF
AAAIRDAPGDEALDLMCRRLISLYGRVETVSTALAVACGHGGDSRPGSVKAIDQVTVDRA
RALFVDFGGQPTVAETDPTSLTIDSIKLSSRHDALALYLSRLVRKLWKAPVIRSTVAPNG
TISVSSTIPQPKLLATQENLERLRKFIESNKGLIQGMSGPSDLQRVSSRQEEVALQAEHQ
ALHALQKLMESISEGISFVLMLFDERVSDIYARLDDTSRQHLKELTYEKLFSQADGRDLA
KLLVKAIVNRNIESGSNVETVADALRRRCGSFCSPDDVVIFKAQESLKRASEQPLNTNQS
RILLNESLTLFQKVARSLTFGNLQNAVAQYIDMKYYAGAVQLCLYVARELDRGNAALSWI
NDGKPAGDPRANAFNERRRVYDLVHEVLRQLDAAASLEPLTVDGRPTLIATKRIEAYEVV
NGSDDEVFHFDLYEWYIEQGWTERILGIDSPHVVTFLQRLASTNVEHADLLCRFYTNRSR
FFDAAEVQAELASSDVALGIKDRLRLLSLAKANANVATVGISRQQQQRLNHEVTDLLEVA
NIQDDLLGRLMADERIDAERKLEIEKALDGRIISLSELFNDYADQAGYYDLCLLIYHTAN
YRNPTTISATWENLIQQTHDEVMARHDALEAGMQPPPMPYEVLTSKIQNIAHHTSLDSFV
FPIQTLLPQLCRYAVTCQQDATIGADPTWPVQLFLSLGVSHDMIVRVLESIFDTQDYGFS
GMVRNRVIEIIVYVVSDWVAEVRRRGGAAKGGSLGPSVSDLLQRCEAALPLPGQGHNNGG
ADLADVRRVLRMLRREVAGLVERLPTASMRFM
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttccctccagctacgccgctgcgcccagtgccgggcgcatttgtcaacacgccg
gccgtcgtctcgcgctaccagacctcgtcgcacgaccccgtccgccggacgctgttcagc
tctgaagcccagaatcctcagacggctgtcgccacgacggcagctgcccatggcacggtg
gcgacgacagcgtcgactgcagtgacggcggcggcgtccaacgcagagggggcaggcctg
gcttcgctgaccccgatgccgcccccacgcgtcgaaaacatgccgcccgtcctcaaggcc
gcaaaggccatcaacaccttcttgcaatccgacgagaacttccccgacctggactcctac
tgcagacagggagcttcgtccgactatgagctgccaggcgccgactccgcctgggctccc
ttccagaagaccaacatgtacccgatcccgaaccaggtctttgaccactacaactctgga
cagctccagaccctcatgggcctctttgctgagatcaaccacgcctgggtggtgattgac
aactcgctcttcctctgggactatacccactccgatcccgagctcattggtttcgaagac
cagccgcacacaatccacgctgttgcgctcgtgcccccgaagcctggcatcttcgttagc
acaatcacacatatcctggtcgtcgcgacgtcatccgaaatcatcctgctcggcctctct
gctgcggatacctctgctggaacaaagacggtcactctgtatcagaccaagatggtcctg
cccactcgcggcagcgacattcgcgtcatcagcggctctgccgatggtcgcatcttcttt
ggcgggtgcagcgataccgacatcaacgagctttactaccagtcggaagagaagtggttt
tcgagtcggtgtggtaaggtcaaccattcgaatccgggctggtcctccgtcgtgagcttg
caggctggcttgtggcctcagagggatcccgagcacctggtggacattgtcatcgacgac
acgaggaagctggtctataccctctctagcgcatcgacgatccgaacatatcacatggag
actcccgagcgactgaataaggtgattgagaagacaaagatccactgccttcgggatatt
gcgcacatgattacacagtccaagctcttgaccgatcgaaccaacattgtgtctatcagc
cccatctcgaagcaagaggcttcgaagctgcatctcatggcgctgacggacactggctgc
cgtctcttcttcagcgccaccaacgcgtcttcttacctatacggctcccaggcaaacctg
gcccctcagagcatgcaggtccagttcatcaagtttcctccttcagcaattgcccggcga
tctacccagattgggctgaacggccagccctcgggagaggctgtggtcgacctcgactca
actatgctgatatccagcaggcagggcgcccgattcccgcccggattcttcctagacttt
gtgaccaggaaggaggaccccaattgcgactcgctgttcgtggctggtcctgagactgga
agaatcaaacgcgtctcacccaacacccccctgagatactttgagcaagcgagctggatc
gacatcggcagccgagcggaggctgttggtttgataacgcaaccatttgcggccgctagc
cagccgattggattcggcaacgaactcgccgtccagtttgacgaaccgcccagcgagttt
gccgttctcaccaacactggcgtccacgtcatccgaaggcggcggctggtggataccttt
gcggcggccatccgggatgcgccgggagacgaggccttggatctcatgtgccgtcgcctc
atttctctctacggccgcgtggagactgtctcgacagctctggcggtggcctgcggtcac
ggcggggactcgagaccaggctccgtcaaggccattgatcaagttacggtggaccgagca
agggcattgtttgtcgattttggcggccaacccacagtagcggaaacagacccgacgtca
ctcacaatcgattcgatcaagctatcctctcgacatgatgcactggcgctatacctgtcg
agactggtccgcaagctttggaaagcccctgtgatccggtcaaccgttgcgcccaacggg
acgatttccgtgtcttcaacgattcctcagcccaagcttctggccacccaggagaacctt
gagcgcctcaggaaattcatcgagtcgaacaagggcctcatccagggaatgtcaggccct
tccgacttgcagcgagtttccagtcgacaggaagaggtggcactgcaggccgaacaccag
gcactgcatgccctgcaaaagctgatggagagcatatcagagggcatctcattcgtgctc
atgctgttcgacgagcgggtatcggacatttacgccagattagacgacacgtctcgacag
cacctcaaggagttgacatacgagaagctgttttcgcaggcggacggcagggacctggct
aagctgctggtcaaggccattgtcaaccgcaacatcgagagcggctcaaacgtcgagacg
gttgcggatgcgctgaggcggaggtgcggcagcttctgcagcccagacgatgtagtcatc
ttcaaggcccaggagtcgctcaagagggcttcggagcagcccctaaacaccaaccaatcc
cggattctcctcaacgagagcttgaccctcttccagaaagtggctcgcagcctgacgttt
ggcaacctgcagaatgccgtggcccagtacattgacatgaagtactatgccggcgcggtg
cagctgtgtctctacgtcgcccgggagctggacaggggcaacgctgccttgtcgtggatc
aacgacggcaagcctgcgggcgatccccgcgccaacgccttcaacgagaggaggcgagtc
tacgaccttgtgcacgaggttctgcgacagctggacgccgccgccagtctcgagccgctg
acggttgatggacggccgacgctgatcgcgacgaagagaatcgaggcgtacgaggtggtc
aacggatctgacgacgaagtgtttcactttgacctgtacgaatggtacattgagcagggg
tggaccgaacggatcctgggcatcgactctccgcacgttgtcacatttttgcagcggctg
gcgagcacgaacgtggagcatgcagacctcttgtgccgcttctacaccaaccgaagtcgc
ttcttcgacgcggccgaggttcaggctgagctggcgagctccgacgttgcgcttggcatc
aaggacaggctgcgactgctcagcctggccaaggccaacgccaacgtagcaaccgtcggt
atcagccgccagcagcagcagaggctcaatcatgaggtgacggatctgctcgaggtggcc
aatatccaggatgatctgctgggccgcctaatggcagacgaaaggattgatgcggagaga
aagttggagattgaaaaggctctggatggtaggatcatcagtctctccgagctcttcaac
gactacgccgatcaggccggatactacgacctgtgcctgctgatctaccacacggcaaac
taccgcaaccccacgaccatctcggcgacatgggagaacttgatccagcagactcacgac
gaggtcatggcgcggcatgacgcgctggaggcgggcatgcagccaccccccatgccatac
gaggtcctgacgagcaagatccaaaacattgctcaccacacgtcgctcgacagcttcgtc
ttcccgatccagacgcttctgccacagctctgccgatacgccgtcacttgccagcaagac
gcgacgattggcgccgaccctacgtggccggtgcagctcttcctgtcgctgggcgtgtcg
cacgacatgattgtgcgcgtgctggagagcatattcgacacgcaggactacggctttagc
ggcatggtgcgcaaccgcgtcatcgagatcattgtctacgtcgtcagcgattgggtggcc
gaggtgcggcgacgtggcggcgcagccaagggaggctcgcttgggccgtctgtcagcgac
ctgctgcagcgttgcgaggctgcgctgccgctgccgggccagggccacaacaatggcggc
gcggacctggcggacgtgcgacgggtgctgaggatgctgcggagagaggtggccgggttg
gtggagcggctgccaacggcgagcatgaggtttatgtga
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