Trichoderma reesei RUT C-30: M419DRAFT_89152
Help
Entry
M419DRAFT_89152 CDS
T06031
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M419DRAFT_89152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_89152
Enzymes [BR:
trr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
M419DRAFT_89152
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M419DRAFT_89152
DNA repair and recombination proteins [BR:
trr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M419DRAFT_89152
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
Fpg-like_C
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ETR98370
JGI:
TrireRUTC30_1_89152
UniProt:
A0A024S1S2
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
VARIVHYLRQRLVGKTIASAAAIDDNSVFGKVGTSGKEVEAALKGRKVISSGSQGKYFWI
TFDKPPHLVMHFGMTGWVHINGERTAYTNYYKKMKESDIAQWPPKFWKFHLTTDAKDGDP
VQVAFTDARRFGRVRLVDCPGDAIRQHSPLVENGPDPVVDKDIFTETYLRDKMKNRHVPV
KAFLLDQAMISGIGNWVADETLYQAKLHPEQYSDTFSAAEIKRLHEAIRYVCQLAVDKLG
DSDQFPDHWLFKHRWGKGDKGAATKLPNGEKIAFITVGGRTSCYAPGVQKKTGAVVSGAK
EEPLVEKGGSGKKSKAVKNELKQEDNEGEEEEPDDVSPPAKKRRGKGATEKPKAALVKEE
VVEEGRRRSTRLRK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
gttgctcgtatcgtccactatctccgccagcggctggttggaaagaccattgccagcgcc
gcagccatcgatgacaacagtgtctttggcaaggttggcaccagcggcaaagaggtcgaa
gcggctttgaaaggcagaaaggtcatctcttccggctcacaaggcaaatacttttggata
acatttgacaaaccgccacatctggtaatgcactttggcatgacgggctgggtccacatc
aacggcgaacgaaccgcctacacaaactactacaagaaaatgaaagaaagcgacatcgcc
cagtggccccccaagttctggaagttccacctcaccaccgacgccaaagacggcgacccc
gtccaagtcgccttcaccgacgcccgccgcttcggccgcgtccgcctcgtcgactgtccc
ggcgacgccatccgccagcactcccccctcgtggagaacggccccgaccccgtcgtcgac
aaggacatcttcacggaaacctacctgcgggacaagatgaagaaccgccacgtccccgtc
aaggcgttcctgctcgaccaggccatgatcagcggcatcggcaactgggtcgccgacgag
acgctctaccaggccaagctccatcccgagcagtactcggatacattctccgctgcggaa
atcaagcggctgcacgaggccattcggtacgtctgccagctggccgtcgacaagctgggc
gactcggaccagttcccggatcactggctcttcaagcaccgctggggaaagggcgacaag
ggcgcggcgacgaagctgccaaacggagagaagattgcattcattacggtgggcgggaga
acgagctgttatgcgccgggcgtgcagaagaagactggcgcggttgtttctggcgcaaag
gaggagccccttgttgaaaagggcggatcagggaagaagagcaaggccgtgaagaacgag
ttgaagcaagaggacaatgagggagaggaagaagagccggatgacgtgagtccgcctgct
aaaaagagacggggcaaaggagcgacggagaaaccaaaagctgctcttgtgaaagaggag
gtggtggaagaaggacggcgtcgatctactcggctgaggaagtga
DBGET
integrated database retrieval system
