Trichoderma reesei RUT C-30: M419DRAFT_9083
Help
Entry
M419DRAFT_9083 CDS
T06031
Name
(GenBank) replication factor C
KO
K10756
replication factor C subunit 3/5
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03030
DNA replication
trr03410
Base excision repair
trr03420
Nucleotide excision repair
trr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M419DRAFT_9083
03410 Base excision repair
M419DRAFT_9083
03420 Nucleotide excision repair
M419DRAFT_9083
03430 Mismatch repair
M419DRAFT_9083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trr03032
]
M419DRAFT_9083
03036 Chromosome and associated proteins [BR:
trr03036
]
M419DRAFT_9083
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_9083
DNA replication proteins [BR:
trr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
M419DRAFT_9083
DNA Replication Termination Factors
ELG1-RFC complex
M419DRAFT_9083
Chromosome and associated proteins [BR:
trr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
M419DRAFT_9083
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
M419DRAFT_9083
Check point factors
HRAD17(Rad24)-RFC complex
M419DRAFT_9083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
Rad17
RCF1-5-like_lid
AAA_assoc_2
AAA_22
AAA_30
AAA_11
AAA_16
DUF815
AAA_24
AAA_19
AAA_5
RuvB_N
AAA_14
AAA_3
ParM_N
DEAD
ResIII
AAA_28
Mg_chelatase
DNAX_ATPase_lid
SLFN-g3_helicase
ATPase_2
AAA_7
TniB
AAA_18
bpMoxR
AAA_25
nSTAND3
RNA_helicase
ExoU_mid_dom
nSTAND_NTPase5
nSTAND6
S6OS1
Motif
Other DBs
NCBI-ProteinID:
ETS01531
JGI:
TrireRUTC30_1_9083
UniProt:
A0A024SAI9
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MSDYEDEMDVDGPGPSADITFSAEATKGKRSAANLPVEAEDTLPWVEKYRPVTLDDVSGH
QDILATINKFVESNRLPHLLLYGPPGTGKTSTILALARRIYGTANMRQMVLELNASDDRG
IDVVREQIKTFASTKQIFTMGGGAAKGNSIAGFKLIILDEADAMTNTAQMALRRIMEKYT
ANTRFCIIANYAHKLSPALLSRCTRFRFSPLKEGDIRVLVEKVVEEEGVKIQGEAVDALV
KLSKGDMRRALNVLQACHASSTPLRLKNEPKPPESEIQRETITTETIYNCIAAPQPDAIK
EIMETLLSTPDVTSCLNTINALKTTQGLALADIITALMEQLTKLEVSAEAMITWLEGLAE
IEHRVAGGGSEMVQTGAVVGVIRGGVELMSK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattacgaggatgaaatggacgtggacggtcctggtccatccgccgatatcaca
ttctcggccgaggcgacaaagggcaagcggagtgctgccaatttgccagtcgaagctgaa
gacacactgccatgggttgaaaagtaccgaccagtaacgctcgacgatgtgtccggccac
caggacatcctagccaccatcaacaagtttgtcgagtcgaaccgcctcccccacctgctt
ctctacggacctcccggcacgggcaagacatctacgatattggccctggcgcggcgcatc
tacggcaccgccaacatgcggcagatggtgctggaactgaacgcctcggacgacagaggc
atcgacgtggtgcgggagcagatcaagacgtttgccagcacaaaacagatctttacaatg
ggcggtggcgcggccaagggcaattcgattgcgggattcaagctcattattctggacgag
gcggatgccatgacgaataccgcgcagatggcgctgcgaagaatcatggagaagtacacg
gcgaacacgcggttctgcatcattgccaactacgcccacaagctcagccccgcgctgctg
tctcgttgtacgaggttccgttttagtccgttgaaggaaggtgatatcagagtgctggtg
gagaaggtggtggaggaggagggtgtcaagatccagggcgaggctgtggatgcgttggta
aagctgagcaagggcgacatgcgacgggcattgaacgtgctccaggcttgtcatgcgtca
agcacgccactgaggctcaagaacgagcccaagccgccggaaagcgagattcagcgcgag
acgattacgactgagacgatttacaactgcatcgcggcgccgcagccagatgccatcaag
gagattatggagacgctcctgagcacgccggacgtgacgagctgtctcaacaccatcaac
gcgctgaagacgacgcaaggcttggcgctggcggacatcatcacggcgctgatggagcag
ctgacgaagctcgaggtgagcgcggaggccatgatcacctggctggaggggctggcggag
attgagcaccgcgttgctggaggaggcagcgagatggtgcagacgggggcggtcgtgggc
gtgatacgaggaggggtggaattgatgagcaagtga
DBGET
integrated database retrieval system
