Trichoderma reesei RUT C-30: M419DRAFT_92823
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Entry
M419DRAFT_92823 CDS
T06031
Name
(GenBank) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M419DRAFT_92823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trr03021
]
M419DRAFT_92823
Enzymes [BR:
trr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M419DRAFT_92823
Transcription machinery [BR:
trr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
M419DRAFT_92823
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Microp_apicomplexa_22
Motif
Other DBs
NCBI-ProteinID:
ETR96983
JGI:
TrireRUTC30_1_92823
UniProt:
A0A024RV95
LinkDB
All DBs
Position
Unknown
AA seq
1666 aa
AA seq
DB search
MNIAQPVASEVESVEFTFLSAKEIQAISVKRIENESTFDNLLNPVPGGLYDPALGSWGDA
PCATCNLNQNNCPGHPGHIQLPVPVYHPVFLDQAYRLLRATCVYCKGFRLPPKDLHKYTC
QLRLLHHGLIHEAHMVATIGENDLAVEIREAIGEGDSEAEEDNSGSDGVTRQREKYVRQC
LQGIKMKRGEAKKGKHEGATEMRREIIKEFLADIIKKRECSSCGGISPTYRKDRFVKIFE
KALSSKEKAKMAQKALKFGDAMTRDVEMGDADHYDDDDDDDDIPEEGAQRYISSMEVRAR
LEELFRKEQDLLSLVYNAKPPTQSSQKVTPDMFFITVVLVPPNRFRPEARTGDSQISEAQ
QNALYKNILGCCSRIARVYKGLEEKTSDMASMHQAWTELQDAVNSLIDKNKNPVQGAAAA
RTEDGIKQLLEKKEGLFRKNMMGKRVNYAARSVISPDPNIETNEIGVPPVFAKKLTYPEP
VTSHNFKDMQQAVINGVDKWPGAFAIENENGQIVNLRNKSVDDRISLANQLLAPTNSNSA
RTRNKKVHRHLTNGDVVLMNRQPTLHKPSIMGHRVRVLPGEKTIRMHYANCNTYNADFDG
DEMNMHFPQNEVARVEALQIADTDHQYLSGTAGKPLRGLIQDHISVSVALCSRDTFFNRS
DFQQLIYSALRPESGHILGERIQLPPPAIIKPAPRWTGKQVISTILANMRPPNCGGLTMS
ENAQLKAEQWGAGSEEGVVLIQDGEFITGILDKSQIGPSSSGMIHAVHEIYGPAIAGKLL
SALGRLLTRYLGMRAFSCGMDDLRLTAEGEAARRRELLAADKLGLKIASSYVSLENQEDA
QNPLLLERLEEVMRDDSKQEGLDLLMNQGSKDITDAVQKALIPNGLEKNFPKNQMQVMTT
SGAKGSRVNASLISCNLGQQVLEGRRVPVMVSGKTLPSFRPFDTNIRAGGYIVNRFLTGI
RPQEYYFHHMAGREGLIDTAVKTSRSGYLQRCIIKGMEGLTVNYDTSVRDADGSLIQFLY
GEDGLDVTKQNYLKDFRFILQNVTSEAAQLKYDPKVGERLGANRQAFQKYMKSAVRHAKA
GDRKGKDPLTASFDPATNAFATSETFYEAMTDYIRENPDGLVREKNSQDKAPLQQKVTLN
KKNAEMLFAMKYLRSLVEPGEAVGIVAGQSVGEPSTQMTLNTFHLAGHSAKNVTLGIPRL
REILMTASRTISTPAMTLYPNPELSQHDTEIFAKSISVLRLSQVLDGIVVEELVGKGKLR
GLAKIYKIKLKFFPGSEYSSTYAVTVSDIMTTVEKKLLRNILSILKREVKKRQSQSTTAT
PEVGVKAGVVETARPEGAAEGGRDDDDDADEDDDDDATGAKNRANRSEAVSYGPNDEDDD
AIQKDLSKGAEYDVSDDDDDDEEAAAAAASSSSSRRKKEDDDEDEGDDEGDETKAPQSWS
AKLRTERVLNAYAEVTDFQCDDRGGEWCNVTLEFDVNIPKVLMLNIVEDAVRQTVVQQVA
GVESCLVSQEKGQTVINTTGVNLRAMQRYSDFIDPHRIQTNDIAAVLDVYGVEACRGNIV
QELSGVFGGHGIKVDNRHLNLIADHMTRNGDFTAFSRMGLRGNVSPFTKMSFETTLGFLK
DALMDGDWDDLTTPSSRLVMGKLGRVGTGGFDVLTQLPTYYVNALA
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgcgcagccggttgcctccgaggtggagagcgtcgagttcaccttcctctcc
gccaaggagatccaggccatctccgtcaagcgcatcgagaacgagagcacctttgacaac
ctgctcaacccggtgcccggcggcctgtacgatccggctctgggatcatggggcgacgca
ccatgcgctacctgcaacctgaaccagaacaactgcccgggacatccaggccacatccag
ctgccggtccccgtatatcacccggtcttccttgaccaggcctaccgattactgcgagcg
acgtgcgtctactgcaagggcttccgtctgcctcccaaggacctacacaaatacacctgt
cagctgcgcctcctgcaccatggcctgatacacgaagcacacatggtggccaccattggc
gagaacgacctggccgtggagatacgagaggctattggtgagggagacagcgaggccgag
gaggacaactctggctcggatggcgtgactcgacagcgagaaaagtacgtccgccaatgc
ctccagggcatcaagatgaagaggggcgaggccaagaagggcaagcatgagggcgccacc
gagatgcgccgcgaaattatcaaggagttcctcgccgatatcatcaagaagcgcgagtgc
tccagctgtggaggcatttccccgacctaccgaaaggatcggtttgtcaagatctttgaa
aaggctctctcgtcaaaagaaaaggcaaagatggcgcagaaggcgctcaagtttggcgac
gccatgacacgagatgtcgagatgggagacgcagaccactacgacgacgacgacgatgac
gatgatattccagaagagggcgcccagagatacattagctccatggaagtgcgggcgaga
ctggaggaattgttcaggaaagagcaggatcttctctcactcgtatacaatgccaagcct
ccgacgcagagctcacagaaggtcactcccgacatgttcttcatcacagtcgtcctggtg
ccgccgaaccgattccgaccagaggcccgcacgggagactcgcaaatctccgaagcccag
caaaacgccctctacaagaacatcttgggttgctgctcaagaattgcccgtgtctacaag
ggcctggaggaaaagacgtcggacatggcgagcatgcatcaggcctggacggagcttcag
gacgcagtcaactcgctcatcgacaagaacaagaaccctgttcaaggcgccgccgccgcg
cgaaccgaagacggaatcaagcagttgctcgagaagaaggagggtcttttccgcaagaat
atgatgggaaagcgtgtcaactacgctgcgcgaagtgtcatctcccccgaccccaacatc
gagaccaacgagattggtgtccccccggtgtttgccaagaagttgacctatcccgagccc
gttactagtcataacttcaaggatatgcagcaggcggtgatcaacggcgtcgacaagtgg
cccggcgcctttgccattgagaacgaaaatggccagattgtcaacctgcgcaacaagtct
gtcgacgaccgcatctctctcgcgaaccagctgctggcgcccaccaacagcaactcggcg
cgcacgaggaacaagaaggtccaccggcacctcaccaacggcgacgtcgtcctgatgaac
cgccagcccacgctgcacaagccgtccatcatgggccaccgggtccgcgtcctgcccggc
gagaagacgattcgcatgcactacgccaactgcaacacgtacaatgccgactttgacggc
gacgagatgaacatgcacttcccgcagaacgaggtcgcccgcgtcgaggccctgcagatt
gccgacaccgaccaccagtacctgtcgggtaccgcgggaaagcccctgagaggtctgatc
caggatcacatctccgtgtccgtcgccctctgcagccgcgacaccttcttcaaccgcagc
gacttccagcagctcatctacagcgccctccgtcccgagagcggccacattcttggggag
cggatccagctgccgccgcccgccatcatcaagccggcgccccggtggacgggcaagcag
gtcatcagcacaatcctggccaacatgaggccgcccaactgcggaggcctgaccatgtct
gaaaacgcccagctcaaggccgagcaatggggcgccgggtcggaggagggcgtcgtgctg
atacaggatggcgagttcataacgggaatcctcgacaagtctcagatcggacccagctca
agcggtatgatacacgccgtgcacgaaatctacggacccgccatcgccggcaagctgctc
agtgccctgggtcggctgctcacaagatacctcggcatgcgagccttttcctgtggaatg
gacgacctgaggctgacggcggagggagaggcggcgcgacggcgagagctcctcgcggcc
gacaagctggggctcaagattgcgtcgagctacgtctcgctggaaaaccaagaggacgcc
cagaacccgctgctgctggagcgcctcgaggaggtcatgcgcgacgacagcaagcaggag
ggtctcgatttgctcatgaaccagggctcaaaggacattacggacgcggtacaaaaggcc
ctgatccccaacggcctcgagaagaacttccccaagaaccagatgcaggtcatgaccact
tccggtgccaagggatcccgtgtcaacgcgtccctcatctcttgtaacctgggacagcag
gttctggagggtaggcgtgtgccggtcatggtgagcggcaagacgctgcccagcttccgg
ccattcgataccaacattcgggcgggcggctacattgtcaaccgattcttgacgggtatc
cggccacaggagtactacttccatcacatggccggacgagagggtctgattgacacggcc
gtgaagacatcgcgttcaggctacctgcagcgctgcatcatcaagggaatggagggtctg
acggtcaactacgacacatccgtgagggacgcggacggctcgctgatccagttcctctat
ggtgaggacggactggacgtcacgaagcaaaactacctaaaggacttccggttcatcctg
caaaacgtcacctcagaggcggcgcagctcaagtacgaccccaaggtcggcgagcgcctg
ggcgccaaccgccaggcgttccaaaagtacatgaagagcgccgtgcgccacgccaaggcc
ggagaccggaaaggaaaggatcccctgacggccagcttcgatccggccaccaacgccttt
gccacttccgagacgttctacgaggccatgacggactacatccgggagaaccccgacggg
ctcgtgcgggagaagaacagccaggacaaggcgcctctccagcagaaggtgacgctcaac
aagaagaacgcggagatgctcttcgccatgaagtacctgcggtcgctggtcgagcccgga
gaggccgtgggcatcgtcgccggccagtccgtgggcgagccgtcgacgcagatgacgctc
aacaccttccacttggccggccactcggccaagaacgtgacgctgggtatcccccgtctg
agagaaatcctgatgacggccagcaggacgatttccacgcccgcaatgacgctgtatccc
aaccccgagctgtcccagcacgacacggaaatctttgccaagtccatcagcgtgctgcgg
ttgagccaggtgctggacggcatcgtggtggaggaattggtgggcaagggcaagctgcgc
ggcctcgccaagatctacaagatcaagctcaagttcttccccggctccgagtattccagc
acgtatgccgtcaccgtctcggacattatgacgacggtggagaagaagctgctgcgcaac
atcctgtccatcctgaagcgagaggtcaagaagcggcagagccagtcgacgacggcgact
cccgaggttggcgtcaaagcaggcgttgtcgagacggccaggccggagggagcagcggag
ggcggccgggacgacgatgacgatgccgacgaggatgacgacgacgacgccaccggtgcc
aagaaccgagcgaaccggagcgaggccgtctcctacggacccaatgacgaggatgacgat
gcgatccaaaaggacctatccaagggggcagagtacgatgtgtcagacgacgacgacgac
gacgaagaggcagcagcagcagcagcatcatcatcatcatcacgaaggaagaaggaagac
gatgatgaagatgagggtgatgacgaaggcgacgagaccaaggcccctcagtcatggtcg
gccaagctgcggacggagcgcgtgctcaacgcgtacgccgaggtgacggacttccagtgc
gacgaccggggcggcgagtggtgcaacgtgacgctcgagttcgacgtcaacatccccaag
gtgctgatgctcaacattgtcgaggacgcggtgcggcagacggtggtgcagcaggtggcg
ggcgtggagtcgtgcctggtgtcgcaggagaagggccagacggtcatcaacacgacgggc
gtcaacctgcgggcgatgcagcgctacagcgacttcatcgacccgcaccgcatccagacc
aacgacatcgccgccgtgctcgacgtctacggcgtcgaggcgtgccgcggcaacatcgtg
caggagctgtcgggcgtctttggcggccacggcatcaaggtcgacaaccgccacctcaac
ctcattgccgaccacatgacgcgcaacggcgacttcacggcctttagccgcatgggcctg
cgcggcaacgtcagcccctttaccaagatgagcttcgagacgacgctcggcttcctcaag
gacgccctcatggacggcgactgggacgacctgacgacgcccagcagccgcctcgtcatg
ggcaagctgggccgggtcggcaccggcggcttcgacgtcttgacgcagcttccgacgtac
tatgtgaatgcgctggcataa
DBGET
integrated database retrieval system
