Trichoderma reesei RUT C-30: M419DRAFT_93022
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Entry
M419DRAFT_93022 CDS
T06031
Name
(GenBank) ARM repeat-containing protein
KO
K14327
regulator of nonsense transcripts 2
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03013
Nucleocytoplasmic transport
trr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
M419DRAFT_93022
03015 mRNA surveillance pathway
M419DRAFT_93022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_93022
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
M419DRAFT_93022
mRNA cycle factors
P-body specific factors
M419DRAFT_93022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
FliD_C
RseA_C
Motif
Other DBs
NCBI-ProteinID:
ETR96885
JGI:
TrireRUTC30_1_93022
LinkDB
All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MDRARKRELRALNEKAWEGDKGLINVSSSLDSSLKKNTAFIKRLRTAISAATLSTFLQEI
RTLSLHKYLSEIISACYEGLCRLKTPGEIDAAVEIVSALHQRFGPAEFTEYLTWLLGKGM
ATPDKSVLKTLAAEVREKEEKERITRQRALLRVITELWLVGVLRTLDDATKPDDATKGAT
GKSVELKTRSNSKPGASADPFPLEVLKDLLGHDREHANLPLLVIFVKAFSWDILGVRTTT
PESRKSGEDEASSTPEETAESSVEDQPFTPPELAEKFKEVLKKYFDDVANHIVRDQKSIH
SQARRNAEAYVKSGEVFEDRQANYEKQVKAQDRLVANAQVIADVIGAEMPNLKDSNDPLA
ASNSTIGLVKTGDYLRSMADGAGIWEDEDERRFYENLVDLKGKVPAILLEDGKKKKQETE
EQNAKKPESSTEGAEAAKAPEPIDDQSMAIANKTIGAQVDALLARLPDLTNKEIIDQTAI
DFCFLNSKASRNRLVKALTEVPKGRSDLLPSWARLVATLGRYMPDVPKGLVDYLDAEFRS
LQRRKEKDFLGQVRLSNIRYLAELTKFGVVPEHVVFHCLKVSLDDFSRMNIEILCNLIEN
CGRYLLRNPETAPRMASFLETLQRKKSVQHIGQPERMLIDNAVYFVDPPERPAIEQKERT
PMELFIRKLIYGDMTKRNYSKILKQIRRLHWEEAEVVAILEKVFSKPGKVKYGNIHLLGI
LLSALYRHHPHFVVRVVDNVVESICFGLEQNDFRFSQRRVAEVKYLGELYNYRMLEHPVI
FDTMYKILLFGYSGPPVLGKYNAFDPPDDFFRIRLISIMLETCGMFFNRGAAGKKLDYFL
SFFQYYVHTKAPLPLDIEFLVHDTFALTRPQWKFVDDIEEATKAFQLAIAQDQKTAGVDK
VAEADDATSGASSEDDNGDMDDVEADGDGDDESASEEEEEAEDGDNVSAHESEYEEAIIV
TRQEEAVDPEDEAEFEREYAKMMAESLESRKFERKQLFDVPLPVRSRNREPSMSTGTGET
QQNGKMAFSLMTKRGNRQQTRTVELPSDSTFAIAMKTQQQAEREEQQRIKNLVLNYDLQQ
SDDQDGECTSLPSRPWPFLHVNSLTCLMVVNDRPTTFYHNRVDKPNKGQRVRKLQLSDVD
W
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgcaaggaagcgcgagcttcgggctctgaatgaaaaggcctgggagggcgac
aaagggctcatcaacgtcagcagctcgcttgactcgtcgctcaagaagaacacagccttc
atcaagcgtctccggaccgccatcagcgccgcaaccctctcgacgttcctgcaagagatt
cgaaccctgagcctgcacaagtacctatccgagatcatttccgcctgctatgagggcctc
tgtcgcctcaagacccccggggaaattgatgccgccgtcgagatcgtgagcgctctccac
caacgcttcggccctgccgagtttaccgagtatctcacctggctgctcggcaagggcatg
gccacacccgacaagagcgttctcaagaccttggctgccgaagtgcgcgagaaggaggaa
aaggagcgcatcacccgccagcgtgctctcctcagggtcattaccgagctctggctcgtc
ggcgtgctacggaccctggacgatgccaccaagccagacgatgccaccaaaggcgctacc
ggcaagtcagtcgagctcaagactcgaagcaactccaagcctggcgcctctgcagacccg
ttcccgctcgaggttttgaaagatttactcggccacgacagggagcacgccaacctgccg
ctgctcgtcatcttcgtcaaggctttcagctgggatatcttgggagttcgaactactacg
cctgaaagccgcaagtctggagaagacgaagcctcgtcgacccctgaagagaccgcagaa
tcctccgtcgaagatcaaccgtttactccccccgaactggccgaaaaattcaaggaagtc
ctcaagaaatactttgacgatgtcgccaatcacattgtgcgcgatcaaaagtcgattcac
tcccaagcccggcgtaacgctgaggcctatgtcaagtccggagaagtctttgaagatagg
caagcaaactacgagaagcaagtcaaggctcaggataggcttgttgccaatgctcaggtc
atagccgatgttattggcgccgaaatgcccaacctgaaagactccaacgatcctcttgca
gcctcaaacagcaccatcggcttggtcaagactggcgactacctacgatccatggctgat
ggtgccggcatctgggaagatgaagacgaacgccgcttctacgaaaatctggtggacctc
aaaggaaaggtcccggccatccttctcgaggacggcaagaagaagaagcaggagactgag
gagcagaatgccaagaagcccgaatctagtaccgagggcgcagaagctgcaaaagcccca
gagccaattgacgatcagtcaatggccattgcgaacaagaccattggagcccaggtagat
gcccttttggctcgcctgcccgacctgaccaacaaggagatcatcgaccagacggccatt
gacttttgctttctcaactccaaggcgtcgcgcaaccgactggtcaaggcgctgacggag
gtcccaaagggacggagcgatttgctgccgtcctgggcccgtctggttgccacactgggc
agatatatgcccgatgtccccaagggattagtcgactatctcgatgccgagtttcgtagc
ttgcagcgccgcaaggaaaaggattttctgggccaggtccgactcagcaacattcgatac
ctggcagagctcaccaagtttggagtagtccctgagcacgttgttttccactgcctcaag
gtcagcctcgacgacttttctcgcatgaacattgagattttgtgcaacttgatcgaaaat
tgtggccgctatcttctcaggaaccctgaaacagcgccgagaatggccagttttctggag
acgctgcagcggaagaagtctgtgcagcatattggccagccggagaggatgctcattgac
aacgccgtgtacttcgttgatcctccagaacggcctgcaattgagcagaaagaaaggact
ccgatggagctctttatccggaagctgatatatggcgacatgactaaacggaattatagc
aagattcttaagcagattcgcagacttcactgggaagaagcagaggtcgttgccattctc
gaaaaggtcttttctaagcctggcaaagtgaaatatggaaacatccatctcctcggcatt
ctcctgagcgctctctaccgtcatcacccacactttgttgtcagagtcgtggataacgtt
gtagagtccatttgcttcgggctagagcagaacgacttcaggttctcccagcgccgcgtt
gccgaggtcaaataccttggcgagctctacaactaccgcatgttggagcatccggtcatc
tttgacaccatgtacaagattttgctgtttggttatagcggaccacctgttctgggcaag
tataacgcttttgatccgccggacgacttcttccggattcgcctcatttccatcatgctg
gaaacctgtggcatgtttttcaaccgaggtgctgctgggaagaagctcgactacttcctc
tcattcttccagtattacgtccataccaaagcgcccctgccgctggacattgagtttctt
gtgcatgatacctttgcactgacgaggcctcaatggaagtttgtagacgacatcgaggag
gcgaccaaggctttccagcttgccattgctcaggaccagaagactgcgggagtggacaaa
gttgcggaagcagacgacgctacaagtggcgcctcttccgaggatgacaacggtgatatg
gatgacgtagaagccgatggcgacggtgacgatgaaagcgcttccgaggaagaagaggaa
gcggaggatggtgacaatgtctctgcccacgaaagcgaatacgaagaggccatcatcgtc
accagacaagaagaagctgtggatcccgaagacgaagccgagtttgaacgagaatacgca
aagatgatggcagagagccttgaatcacgcaagtttgagcgcaaacagctgtttgacgtg
ccgctgcccgtgcggtcgagaaaccgcgaaccgtccatgtctaccggcactggggagacg
cagcagaatggcaaaatggcattctcactgatgacgaaaagaggcaaccggcaacagact
cggaccgtcgaactaccttcggactcgacatttgcaatcgctatgaagacacagcagcaa
gcagagagagaagaacagcagcgaatcaagaaccttgttctgaactatgacctccaacag
agtgatgaccaagacggtgagtgcaccagcctaccctctcgaccctggcccttcttgcac
gtaaactcactaacatgcctgatggtagtcaatgaccggccgacaacgttctaccacaac
cgggtagacaaaccgaacaagggccagcgtgttcggaagctgcagctcagcgatgtggat
tggtag
DBGET
integrated database retrieval system
