Trichoderma reesei RUT C-30: M419DRAFT_94044
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Entry
M419DRAFT_94044 CDS
T06031
Name
(GenBank) P-loop containing nucleoside triphosphate hydrolase protein
KO
K10756
replication factor C subunit 3/5
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03030
DNA replication
trr03410
Base excision repair
trr03420
Nucleotide excision repair
trr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M419DRAFT_94044
03410 Base excision repair
M419DRAFT_94044
03420 Nucleotide excision repair
M419DRAFT_94044
03430 Mismatch repair
M419DRAFT_94044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trr03032
]
M419DRAFT_94044
03036 Chromosome and associated proteins [BR:
trr03036
]
M419DRAFT_94044
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_94044
DNA replication proteins [BR:
trr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
M419DRAFT_94044
DNA Replication Termination Factors
ELG1-RFC complex
M419DRAFT_94044
Chromosome and associated proteins [BR:
trr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
M419DRAFT_94044
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
M419DRAFT_94044
Check point factors
HRAD17(Rad24)-RFC complex
M419DRAFT_94044
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA
AAA_16
Rep_fac_C
AAA_24
Rad17
ATPase_2
T4SS-DNA_transf
ABC_tran
ImpA_N
SLFN-g3_helicase
DUF7804
C2CH-4th_BIRD-IDD
Motif
Other DBs
NCBI-ProteinID:
ETS06420
JGI:
TrireRUTC30_1_94044
UniProt:
A0A024SMC0
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MALIVDKHRPRSLEALSYHHELSERLQSLAQSGDFPHLLVYGPSGAGKKTRIVATLKELY
GPGVEKIKIDARVFQTSSNRKLEFNIVASNYHLEITPSDVGQYDRVVVQDLLKEVAQTQQ
VDQSAKQRFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTL
LVRVAAPTHAEICDALAQSAKRENWEVVQGLHQRIAEESGRNLRRALLMLEAVHAQNEKV
TDTTPIPPADWEALIGQIAKEIIEEHTPARILQVRAKLYDLLTHCIPPTTIIKTLTFKLL
NLIDDGLKAEVIKWSAFYEHRIKTGTKVIFHLEAFVAKFMRILEMYLMSMDM
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggccctcatcgtcgacaagcatcgcccgcggtccctcgaggctctgtcatatcaccat
gagctctcagaaagactccagtctctggcccaaagcggcgactttccgcacctgctcgtc
tacggcccctcgggagccggcaagaaaacgaggatagtagcgacgctgaaggagctgtac
ggccccggcgtggagaagatcaagatcgacgcccgagtgttccagacgtctagcaaccga
aagctcgagttcaacattgtcgcctccaactaccacctggaaatcacgccgtcggacgtg
gggcaatacgatcgagtcgtcgtgcaggatctgttgaaagaggtggcgcagacacagcag
gtggaccagtcggcgaagcagcggttcaaggtcgtggtcatcaacgaggcggaccatctc
acccgagatgcccaggcagcgcttcgtcgcaccatggaaaagtactctccaaacttgcgt
ctgattctcttggcgaattcgacggccaatatcattgcgccgattcgttcgagaacattg
ctcgttagagtggccgctcccacacatgccgaaatctgcgacgccctcgcgcagtcggcc
aagagggagaattgggaggttgttcaggggctacaccagcggatagctgaggagagcggg
aggaatctgcgtcgtgcgctgttgatgttggaggccgttcacgcacaaaatgagaaagtc
acagataccacgcctatcccgcctgcggactgggaagcactcatcggccagatcgccaag
gagatcattgaggaacacacgcctgcgcggatcctgcaggtgcgcgccaagttgtacgat
ctgctgacgcactgcatcccgccgaccacgatcatcaagacgctcacattcaagctgctg
aacctcattgacgacgggctcaaggcggaagtcataaagtggtctgccttttacgagcac
cggatcaagacgggcaccaaggtcatctttcacctggaggcctttgtggcgaagtttatg
cgcatcttggaaatgtatctgatgagcatggacatgtaa
DBGET
integrated database retrieval system
