Trichoderma reesei RUT C-30: M419DRAFT_94618 Help Entry M419DRAFT_94618   CDS       T06031                                  Name (GenBank) Coatomer, alpha subunit   KO K05236   coatomer subunit alpha Organism trr  Trichoderma reesei RUT C-30 Brite KEGG Orthology (KO) [BR:trr00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:trr04131]     M419DRAFT_94618   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:trr04147]     M419DRAFT_94618 Membrane trafficking [BR:trr04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     M419DRAFT_94618 Exosome [BR:trr04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    M419DRAFT_94618   Exosomal proteins of bladder cancer cells    M419DRAFT_94618 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd TPR_COPA_B Beta-prop_WDR3_2nd WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_SCAP ANAPC4_WD40 Beta-prop_WDR41 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st TPR_IFT80_172 Beta-prop_ACSF4 TPR_ZFYVE26 Motif Other DBs NCBI-ProteinID:  ETS06888 JGI:  TrireRUTC30_1_94618 UniProt:  A0A024SLF2 LinkDB All DBs Position Unknown AA seq 1220 aa AA seqDB search MQSSPGMLTKFESKSSRAKGIAFHPKRPWILVALHSSTIQLWDYRMGTLIDRFEEHDGPV RGVDFHKTQPLFVSGGDDYKIKVWSYQTRRCLFTLNGHLDYVRTVFFHHELPWILSASDD QTIRIWNWQNRSLICTMTGHNHYAMCAQFHPKEDLVVSASLDQSVRVWDISGLRKKHSAP TSMSYEDQIARANQNQTDMFGNTDAVVKFVLEGHDRGVNWVAFHPTMPLIVSAGDDRLVK LWRMSETKAWEVDTCRGHFQNASGCLFHPHQDLILSAGEDKTIRVWDLNKRTAVQSFKRE NDRFWVIAAHPEINLFAAGHDNGVMVFKLERERPASAVHQNTLFYITKEKHVKSYDFQKD VESPTLLSLKKLGSPWVTPRTLSYNPAERSILVTTPNDGGSYELVNLPRDGSGAIEPSES KRGSGNSAIFVARNRFAVLNVANQTIDIKDLSNNTARSFKPPAGTTDIYFGGTGNLLIIT PTTVYLYDIQQKKTTAELSINGVKYIVWSNDGLYAALLSKHNVTIVTKTLEQISTLHETI RIKSATWDDAGILLYSTLNHVKYALLNGDNGIVRTLDQTVYLVRVKGRNVYCLDRAAKPR ILRIDPTEYRFKMALVKRNYEEMLHIIRTSSLVGQSIISYLQKKGYPEIALQFVQDPTTR FDLAIECGNLEVAVEMAKELDKPKFWTRLATEALSHGNHQIVEMCYQKLKQFDKLSFLYL TTGDHSKLARMAKIAEHRGDFTARFQNALYLGDVEDRIQMLKEIDLYPLAYTTAKSHGLE EECEAILEASGLTEEQLTMPALGKPLVPPKPVVSTFKSNWPTKASSQSYFESALLGQVEG LSLEDEPSAANGVDAEHAAKDEPAENLIAIAGEDDDDAAGWDMGDDDVPEIENDFVNVDS AEAGGAGSCEADAWARNSPLAVDHIAGGSFESAMQLLNRQVGAVEFGPLKPRFLEVYRSS KTFLPALANLPPLVNYVRRTIDETDLRKVLPIIPRDLEHLASNDLQKGYDSMKANKLEDG VKIFQGILHAILVNAVSSESEVSEAKKLLASAREYTIAMNIELARRNLGSADEVAQDPAK LKKSLELAAYFTIPKIEVPHRQIALLSAIKVAIKSKNYNSALGFANRIIANGGSSKIVEN AKKTKAQCERNPTDSIEIEFDQFAEFEICAASHTPIYSGAPYEECAFDGSKYHSSYKGSV CRVCGVCEIGKHGSGLRLFS NT seq 3663 nt NT seq  +upstreamnt  +downstreamnt atgcagtcctccccaggaatgttgaccaagtttgagtcgaagtcgtccagggccaaagga atcgcgttccatccgaaaagaccatggattctcgtcgcccttcactcctccacaatccag ctctgggattaccgcatgggcacgttgatcgatcgattcgaggagcatgatggtccggtc cgcggcgtcgactttcacaagacacagccgctctttgtatccggtggcgacgattacaag atcaaagtctggtcgtaccagacccggcgatgtctcttcacactcaacggccatctcgat tacgtgcgaaccgtcttcttccaccacgagcttccatggattctgtccgcctccgatgac cagaccatccgaatctggaactggcagaaccgtagcttgatttgcaccatgaccggccat aaccactatgccatgtgcgcccaattccaccccaaggaagatctcgtggtctcggcctcg cttgatcagtcagttcgtgtctgggacatctccgggcttcggaagaagcactccgcaccg acttccatgagctacgaggaccaaatcgcgcgtgcgaaccaaaatcaaacggacatgttc ggcaacaccgatgccgtcgtcaaattcgtcctggaaggccacgaccgtggagtcaactgg gtagctttccatcctaccatgcccctgatcgtttcggccggcgacgatcgcctagtcaag ctctggcgcatgagtgaaaccaaggcctgggaagtcgacacgtgccgcgggcacttccag aacgcctcaggctgtctgttccacccccatcaggacctgattctgtccgccggagaggat aagacgatacgtgtctgggacctcaacaagaggactgctgtgcaatccttcaagagggag aacgaccgcttctgggttattgcggctcaccccgagatcaacctgttcgcagccggccat gacaatggtgtcatggttttcaagctggaacgcgagcgccctgcctcggcagtccaccag aacactctcttctacatcaccaaagagaagcacgtcaagtcctacgatttccaaaaggat gtggagagcccgacgctgctgtcgctcaagaagcttggaagcccctgggttactcctcgg accctgtcttacaatcccgctgagaggtctatcctcgtaaccacccctaacgatggtggt tcttacgaattggtcaaccttcccagagatggctctggcgctattgagccgtcagagtcc aagcgcgggtcgggcaactccgccatctttgtcgccagaaaccgcttcgctgtcctcaac gttgccaaccagacgattgatatcaaggatctgtcaaacaacacagctcgttcgttcaag cctccggccgggactactgatatctactttggaggcacgggcaatcttctcatcatcaca cccacgactgtctatctgtacgatatccagcagaagaagactaccgcagagctttccatc aacggcgtcaagtacattgtgtggtccaacgacggcctttacgccgccttgttgagcaaa cacaacgtgaccattgtcacaaagacactcgagcaaatcagcactctgcacgagactatt cgcatcaagagtgccacttgggatgatgcgggcattcttctctactcgaccctgaaccat gtcaagtatgctttgctcaatggcgacaatggtatcgttcggactcttgatcagaccgtc tacctcgtgcgcgtcaagggccgcaacgtctattgcttggatagagcagcgaagcctcgc attctgcgcatcgacccgacggagtatcgcttcaagatggccttggtcaagcgaaactac gaagaaatgcttcacatcatccgcacttccagccttgttggccaatccatcatttcttac ctccagaagaagggttaccccgagattgcgctgcagtttgtccaggacccgacaactcga ttcgatctggcaattgaatgcggcaatctggaagttgctgtggagatggccaaggaactg gacaagcccaagttctggactcgactggctactgaagcactttcccacggcaaccaccag attgtggagatgtgctaccagaagctgaagcagttcgacaagctgtcgttcctctatttg acaacaggcgaccactcgaagcttgctcgaatggccaagatcgcagagcatcgtggagac tttaccgcgcgattccagaacgccctgtaccttggcgatgtcgaggaccgcattcagatg ctgaaggagattgatctctatccccttgcgtatactacggccaaatcccacgggctggag gaagaatgcgaagctatcctcgaggcctctggtctcacagaagagcagctaaccatgcct gcgttgggcaagccgttggtgccaccgaagcccgtggtgtcgaccttcaagagcaactgg cccaccaaggctagctcacagtcttactttgagagcgctctgcttggccaggttgaaggc ttgtcactggaggatgagccaagtgctgccaacggcgtcgacgccgagcatgccgcaaag gacgaaccggcagagaatctcattgctatcgctggcgaagacgatgacgatgcagcaggc tgggatatgggtgatgacgatgtccctgagatcgagaacgactttgtgaatgtcgacagt gcggaagccggcggtgctggaagctgtgaggctgatgcctgggcacgaaactcacctctg gctgttgaccacattgctggcggctcatttgaatcagctatgcagctcttgaatcgccag gtgggcgcagtcgaattcggccccctgaagccccgattcttggaggtctatcgatcttcc aagactttccttccggcgttggccaacctgcctcccttggtcaattacgttcgccgtact attgatgaaacggacctacgaaaggttttgcccattatcccgcgcgatcttgagcatttg gcctcgaatgatctgcaaaagggctacgattcgatgaaggcgaacaagctggaagacggc gtcaagatcttccagggtatcctgcatgctatcttggtcaacgccgtctccagcgaaagc gaagtgtcggaagccaagaagctgcttgcttcagcaagggaatacaccattgcgatgaac attgagcttgccaggagaaaccttggctcggccgatgaggtcgcccaagaccccgcgaaa ctgaagaagagcttagaacttgctgcttacttcaccattcccaagattgaggtgcctcac aggcagattgcactgctaagcgctatcaaagtggcaattaagagcaagaactataattct gctttgggcttcgcgaaccgcatcatcgcgaatggaggttcgagcaaaatcgtcgagaac gccaagaagacgaaagctcaatgcgagagaaacccgaccgacagcatcgagattgaattt gaccagtttgcagaatttgaaatttgtgccgccagccatactcccatctacagcggagcc ccatacgaagagtgtgcctttgatggctcaaagtatcactcgagctacaagggatctgtt tgtagggtgtgcggagtttgcgagattggtaagcacggtagcggcttgagattgttttca tag

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