Trichoderma reesei RUT C-30: M419DRAFT_95118
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Entry
M419DRAFT_95118 CDS
T06031
Name
(GenBank) tRNA-intron endonuclease catalytic domain-like protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
trr
Trichoderma reesei RUT C-30
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
trr03016
]
M419DRAFT_95118
Enzymes [BR:
trr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
M419DRAFT_95118
Transfer RNA biogenesis [BR:
trr03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
M419DRAFT_95118
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
Arabino_trans_N
Motif
Other DBs
NCBI-ProteinID:
ETS05138
JGI:
TrireRUTC30_1_95118
UniProt:
A0A024SJL4
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MEQPPQQQQQQQLIRIANISGRYLVFDPDAVSALRRRANTNGTLVGTTPQQPTQNIFLGL
PIELRPEEVDALVRAGVAYVVDDVAAHKSALLSLGPDERRAYIGSLRSRKQAAHKVFAEM
TAHKASIAATKADKKKRDPGASEGGGGGGGGKLDGSSAYSRNSQVTSLGVTPTSSVNYVS
PDAHALPVEHNRDSERGALCQFMLSNGFYMTPGLRFGARYSVYPGDPLRFHAHFMANEYG
WEEEIPILDIVGGGRLATAVKKAFLIGGREPSATKPDSALPSVRSFSIEWAGM
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacccccccagcagcagcagcagcagcagctcatccgcatcgccaacatctcg
gggcggtacctcgtcttcgacccggatgccgtgagcgccctccgccgcagggcaaacacc
aacggcaccctggtgggcaccacgccgcagcagccgacgcagaacatcttcctgggcctg
cccattgagctgcggcccgaggaggtggacgcgctggtgcgagcgggcgtcgcctacgtc
gtggatgacgtcgccgcgcacaagtcggcgctgctgtcgctcgggcccgacgagcggagg
gcgtacattggctcgctgcggtcgcggaagcaggccgcgcacaaggtctttgccgagatg
acggcccacaaggcttccattgcggctaccaaggccgacaagaagaagcgtgatccgggg
gcatctgaaggcggtggcggcggcggcggcggcaaacttgatggcagcagtgcctactct
cgcaatagccaagtgacttcgctgggcgtcacgccgacttccagcgtcaactatgtctcc
ccagatgctcacgccctgcctgtggaacacaaccgtgactcggaaaggggggcgctgtgc
cagttcatgctgagcaacgggttctacatgacgcccggcttgcgcttcggtgcccgctac
agcgtctatcccggtgatcccctgcgtttccatgcgcacttcatggccaacgaatacggc
tgggaggaagagatacccatccttgacatcgtaggcggcggcagactggcaacagctgta
aagaaggcgttcctcataggcggccgtgagccgtccgccacaaaacctgattcggccctc
ccttctgtaagaagcttcagcatagagtgggccggcatgtag
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