Trichoderma reesei RUT C-30: M419DRAFT_95143
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Entry
M419DRAFT_95143 CDS
T06031
Name
(GenBank) hypothetical protein
KO
K03504
DNA polymerase delta subunit 3
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03030
DNA replication
trr03410
Base excision repair
trr03420
Nucleotide excision repair
trr03430
Mismatch repair
trr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M419DRAFT_95143
03410 Base excision repair
M419DRAFT_95143
03420 Nucleotide excision repair
M419DRAFT_95143
03430 Mismatch repair
M419DRAFT_95143
03440 Homologous recombination
M419DRAFT_95143
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trr01009
]
M419DRAFT_95143
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trr03032
]
M419DRAFT_95143
03400 DNA repair and recombination proteins [BR:
trr03400
]
M419DRAFT_95143
Protein phosphatases and associated proteins [BR:
trr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
M419DRAFT_95143
DNA replication proteins [BR:
trr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
M419DRAFT_95143
DNA repair and recombination proteins [BR:
trr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
M419DRAFT_95143
MMR (mismatch excision repair)
DNA polymerase delta complex
M419DRAFT_95143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CDC27
DUF5470
Motif
Other DBs
NCBI-ProteinID:
ETS05156
JGI:
TrireRUTC30_1_95143
UniProt:
A0A024SHC2
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MDEAKKYLSDRLLSEEVPVTYRLLSRALNIRVNVAKQKLYEFYKSQNASKVGSVHATYLI
YGSKAQDRQPDSGDTDMDGSAPEHEPLSDHVPTKTVTIVAEDKLKEVLAEYEQVSSFHIY
SLAPFPQRDLSMLSDVSRSLSEYRNAEDTAKAFDTYGIITNPQARKRDRKGRPQIPAPSA
PKPVAKQESQAATPKPSQPEKAKPEAKETPSTSAEATPSSSAGKKPPATLKRGASGGIMQ
SFAKAAAKPPKAKPKPEPEPKAKDEDTSMVLSDDGEADEEDVLPPLKTVDLEALKRTRKE
REEALLRMMQDPEDDVKEAAKKEYEQSDEEMEEGSEPEPEPEPEPEPEPEQQPKEEKEPT
EVVSNSSNGRRRGKRRVMKKKRILDDQGYMVTIQEAAWESFSEDEAPAPTPAAAKATPTP
TPASSTQKAKKGAAGKGGSQGSIMSFFSKK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggccaaaaagtacctttcagaccggctgctgagcgaagaggtgccggtgaca
tatcgcctcttgagcagagcgctcaacatccgggtcaatgtcgccaaacagaagctctat
gagttctacaagagtcagaatgcttccaaggtgggctcagtgcatgccacctacctcatc
tatggctccaaggcgcaagacagacagccagactctggcgacaccgacatggacggctca
gcgccagagcatgagcccctttccgaccatgtgcccaccaagacggtcactatcgtggcc
gaggacaagctgaaagaggtgctggctgaatacgagcaagtctcttcgttccacatctac
agtctggctccgtttccccaaagagacctgtccatgctctccgacgtgtcaagatcgctc
tccgaatacagaaatgcagaagacacggcaaaggcattcgacacatacggcatcatcacc
aatccccaggcccgcaagcgagaccgaaaaggccgcccccaaatcccggccccgagtgcg
cccaagcccgtcgccaagcaggagtcacaggcggccacgccaaagcccagtcaaccggaa
aaggccaagccagaggccaaagaaaccccatctacctccgccgaagccactccgtcgtcc
agcgccggcaagaagcctcccgcgacgctaaagcgcggcgcctccgggggaatcatgcag
tcctttgccaaggcggcggcgaagcctcccaaggcgaagccgaagcctgagcctgagccc
aaagccaaggacgaggacaccagcatggttttgtctgacgatggcgaagccgacgaggaa
gatgtgcttcctcctctcaagactgtcgatctagaggctctgaagaggacaaggaaagag
cgtgaagaggcgcttttgcgcatgatgcaggatccggaagacgatgtcaaggaggcggcc
aagaaggaatacgagcaatcagacgaggagatggaagagggatccgagccagagccagaa
cccgaacctgaacccgagcccgagcccgaacagcaaccaaaggaagaaaaggagcctacg
gaggtggtgtccaattccagcaacggccgccggaggggcaagcgacgggtcatgaagaag
aagcgcatactggacgaccagggatacatggtgaccattcaggaggctgcgtgggagtcg
ttttccgaagacgaggctcctgcaccaacaccagcagctgcaaaagcaacgcctacacca
acgccggcttcttcgactcagaaggcaaagaagggagcggctgggaagggcggaagccaa
ggcagcatcatgtcgtttttctccaaaaagtag
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