Trichoderma reesei RUT C-30: M419DRAFT_95453
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Entry
M419DRAFT_95453 CDS
T06031
Name
(GenBank) DEAD-domain-containing protein
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
trr
Trichoderma reesei RUT C-30
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trr03009
]
M419DRAFT_95453
Enzymes [BR:
trr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M419DRAFT_95453
Ribosome biogenesis [BR:
trr03009
]
Eukaryotic type
Pre-60S particles
Helicases
M419DRAFT_95453
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-ProteinID:
ETS05409
JGI:
TrireRUTC30_1_95453
UniProt:
A0A024SLC0
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MPGRRAASPAPSEPELDILDSLYPGDDDNGGQGLGKDGQDGLDFDGFFHASAAGGGEDDD
EAFIALQQAASYRKASNLKGRTVKKGGGFQAMGLNANLLKAIARKGFSVPTPIQRKTIPL
VLERKDVVGMARTGSGKTAAFVIPMIERLRAHSSKFGSRALILSPSRELAIQTLKVVKEL
GRGTDLKSVLLVGGDSLEEQFGFMSANPDIVIATPGRFLHLKVEMGLDLSSIKYVVFDEA
DRLFEMGFATQLTEILHALPPSRQTLLFSATLPASLVEFARAGLQDPSLVRLDADTKVSP
DLETAFFSIKGAEKEGSLLHILHDVIKVPLGPPASAVEETEKNSKKRKRQPDNGAGKPTE
HSTIIFAATKHHVEYLYNLLKHAGFATSHVYGSLDQTARRIQVEDFRMGKTNLLVVTDVA
ARGIDIPVLANVINYDFPPQPKVFIHRVGRTARAGQRGWAYSLVRDVDAPYLLDLQLFLG
KKLVLGQTETEPSYRDDVVVGSLQRDAVGTHVEWLNKFLKENEDVEALRGVAAKAEKLYM
KTRNSASSQSAKRAREEVASKGWSQLHPLFGKDVDGMEEARAAMLARISNFKPQETIFEV
GQGDKATSAAAEVMKQLRKRVKPRKQEADDEEMSGVDDDFGGAASHAQPDSDDDDDEDAN
MEDDDEDDDGYGNDELEVTITNTGSKSSSKKDKGRTDFRDNDVFMSYTPRTVNAAEERGY
GVHSGGQGSSFVELARDATMDLTNDDTAKAFGAPTRPRMRWDAKAKKYVNSANDEDGSRG
AKMIVGESGVKIAASFSSGRFDKWKKANRVHKLPQVGELVKPGSGNGVAQLPSGVRYKHK
KELAPKEADKYRDDFHQRKKRVNEAREKRIGRFKDGMGSKKEVKGVTDIRKAREEKERKR
AKTGRHQTGPHKRR
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtcgccgtgcagcctcgcctgcgccctccgagccggagctggacattctcgac
tcgctgtatcccggcgacgacgacaatggcgggcagggcctgggcaaagacggccaggac
gggctcgactttgacggcttcttccatgcgagcgcggctggaggcggcgaggacgacgat
gaggcctttatcgcgctgcagcaggcagcttcataccgaaaggcgtcaaatctaaagggc
aggacggtcaagaagggcggtggcttccaggcaatgggcctcaatgcgaacctcctcaag
gccatcgcccgaaaaggattctccgtcccgacgccgattcagcgaaagacgatccccctg
gtcctcgagcggaaagacgtcgtcggcatggcgcgaacaggttccggaaagacggcggcc
tttgtcatccccatgattgagcgcctgcgcgcccacagctccaagtttggcagcagggcg
ctgattctctcgccttcgcgcgaactggccatccagacgctcaaggtcgtcaaggagctc
ggccgaggaacggatctcaagtctgtgcttctggttggtggtgacagcttggaggagcag
tttggcttcatgtcggcgaatcccgacattgtgattgccacgcccggtcgattcctgcat
ctcaaggtcgagatgggccttgacctgtcctcaatcaagtacgtcgtctttgacgaggcc
gatcgactgttcgaaatgggtttcgctacccagttgaccgagattctacacgccctcccg
ccttcaagacagacgcttctcttctccgcgacgctacccgcttccttagtcgagtttgcc
cgcgccggtctgcaggatcctagcctggtgcgactcgacgcagacaccaaggtctctccc
gatctggagactgcattcttctccatcaagggagccgagaaggaaggctctctacttcac
atcctacacgatgtcatcaaagttcctctgggtccgcctgcaagcgctgtggaggagaca
gagaagaattccaagaagcgaaagcgccagcctgacaacggcgccggcaagcccacagaa
cactcgacaatcatctttgccgctacaaagcatcacgtcgagtacctctacaatctgttg
aagcacgctggctttgcaacatcccatgtctacggttcgcttgatcagaccgctcgacgg
atacaagtcgaggacttccggatgggcaagacgaacctgctcgtcgtcacagacgtcgcc
gccagaggtatcgatatccccgtgctggccaacgtcatcaactacgactttcctccccag
ccaaaggttttcatccaccgagtaggtcgtacggctcgtgcgggccagaggggttgggcc
tacagtctggtccgagacgtggatgctccgtatctgctcgacctgcagcttttcctaggc
aagaagctggttctcggacaaacagaaacagagccatcatacagagacgacgttgttgtc
ggatctctgcagcgcgatgccgtgggaacacacgtcgaatggctcaacaagttcctgaag
gagaatgaagacgtcgaggccctgcgaggggttgctgccaaggcagagaagctctacatg
aagacgcgcaactcggcctcgagccagagcgcaaagcgcgcgagagaagaggtggcctcc
aagggctggtcgcagctgcatccgctcttcggcaaggacgtcgacggcatggaagaggcg
cgcgccgccatgctggcccggatcagcaacttcaagccccaggaaaccatcttcgaggtc
ggacagggcgacaaggcgacgagcgcggcggcagaagtcatgaagcagctccgcaagaga
gtcaagccgcgcaagcaagaagccgacgacgaggaaatgtccggcgtagacgacgacttt
ggcggtgctgcttctcacgctcaaccagacagcgatgacgatgacgacgaggatgcgaac
atggaagacgacgacgaggacgacgacggctacggcaacgacgagctcgaggtaacaatc
accaacacaggcagcaagtcgtcgtccaagaaagacaaaggccgcaccgacttccgcgac
aacgacgtcttcatgtcctacaccccgcgcaccgtcaacgccgccgaggagcgcggctac
ggcgtgcactcgggcggccagggctcgagcttcgtggagctcgcccgcgacgccaccatg
gacctgaccaacgacgacacggccaaggcctttggcgcgcccacgcgcccgcgcatgcgc
tgggacgccaaggccaagaagtacgtcaacagcgcaaacgacgaggacggctcccgcggc
gcaaagatgattgtcggcgagagcggcgtcaagatcgcggccagcttcagcagcggccgc
ttcgacaagtggaaaaaggccaaccgcgtgcacaagctgccccaggtcggcgagctggtc
aagcccggcagcggaaacggcgtcgcccagctgccctcgggcgtgcgctacaagcacaag
aaggagcttgcgcccaaggaggcggataagtacagggacgacttccaccagcgcaagaag
agggtcaacgaggcgcgtgagaagaggattggaaggttcaaggatggcatgggaagtaaa
aaggaggtcaagggcgttacggacattcgcaaggcgagagaggagaaggagcgcaagagg
gccaagacggggcggcatcagaccggtcctcataagaggaggtga
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