Trichoderma reesei RUT C-30: M419DRAFT_95713 Help Entry M419DRAFT_95713   CDS       T06031                                  Name (GenBank) hypothetical protein   KO K12830   splicing factor 3B subunit 3 Organism trr  Trichoderma reesei RUT C-30 Pathway trr03040   Spliceosome Brite KEGG Orthology (KO) [BR:trr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     M419DRAFT_95713  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:trr03021]     M419DRAFT_95713    03041 Spliceosome [BR:trr03041]     M419DRAFT_95713    03036 Chromosome and associated proteins [BR:trr03036]     M419DRAFT_95713 Transcription machinery [BR:trr03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      M419DRAFT_95713 Spliceosome [BR:trr03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     M419DRAFT_95713  Complex B     M419DRAFT_95713  Complex C    U2 SnRNP specific factors     M419DRAFT_95713 Chromosome and associated proteins [BR:trr03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      M419DRAFT_95713     TFTC complex      M419DRAFT_95713 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Beta-prop_RSE1_1st Beta-prop_RSE1_2nd CPSF_A Beta-prop_BBS7 Motif Other DBs NCBI-ProteinID:  ETS05584 JGI:  TrireRUTC30_1_95713 UniProt:  A0A024SLS3 LinkDB All DBs Position Unknown AA seq 1212 aa AA seqDB search MATTSNMFLYSLTIQPPTNVVQAVLGQFAGTKEQLIITGAGSRLALLRPDSSQGKVITVL SHDIFGIIRSLAAFRLAGSNKDYLILATDSGRITIIEYLPKENRFSKLHLETFGKSGVRR VIPGEYLACDPKGRACLIASIEKNKLVYVLNRNSQAELTISSPLEAHKPGVLVISMVALD VGYANPVFAALEIDYTEVDQDSTGEALRDLETQLVYYELDLGLNHVVRKWSEPVDSTASL LFQVPGGNDGPSGVLVCGEENITYRHSNQEAFRVPIPRRRGATEDPSRKRTIISGVMHKL KGSAGAFFFLLQTEDGDMFKVTIDMVEDDEGNTTGEVRRLKIKYFDTVPPAASLCILKSG FLYVASQFGNFSFYQFEKLGDDDEELEFTSDDFPVDAQASYDPVYFYPRPLENLVLVESI PSMNPLLDCKIANLTGEDAPQIYTICGNGARSTFRTLKHGLEINEIVSSELPGIPSAVWT LKLNRNEQYDAYIVLSFTNGTLVLSIGETVEEVSDSGFLTSVPTLAAQLLGEDGLIQVHP KGIRHIRNGQVNQWDAPQHRSIVAATTNAHQVAIALSSGEIVYFEMDDDGSLAEYDEKKE MFGTVTCLSLGEVPEGRLRSSFLAVGCDDCTVRILSLDPESTLENKSVQALTAAPTSLAI ISMEDSSSGGSTLYLHIGLYSGVYLRTVLDEVTGELTDTRQKFLGPKQVRLFQVTVQGRT CVLGLSSRPWLGYADPITKTFVVTPLNYVDLEWGWNFTSEQCEEGIVGIQGQTLRIFSVD RLGDTLIQSSIPLTYTPKKMVKHPDQPLFYVIEADNHTLSPALCAQLLADPARVNGDSKV LPPEEFGHPRGNRRWASCISVVDPLAEDGQVLQRIDLEENEAAVSLAIVTFASQENETFL VVGTGKDMVLNPRSFSDAFVHIYRFERDGRGLVFIHKTKVEEPPMAMIPFQGRVLVGIGK MLRIYDLGMRQLLRKSQAEVAPQQIVSLNAQGSRIVVGDVQQGITYVVFKQQTNKLIPFV DDTVARWTTCSTMVDYETTAGGDKFGNIFIVRAPQKASEEADEEPAGLHLLNARSYLHGT SHRLDLMCHLYTQDIPTSITKTSLVVGGQEVLLWSGLMGTIGVLIPFVTREDADFFQSLE QHLRAEDPPLAGRDHLMYRSYYAPMKGVIDGDLCERYALLPNDKKQMIAGELDRSVREIE RKISDIRTRSAF NT seq 3639 nt NT seq  +upstreamnt  +downstreamnt atggcgaccacttccaacatgttcctctactcgctgacgatccagccgccaaccaacgtc gtccaagcggttctgggtcagttcgcgggcaccaaggagcagctcatcatcacgggtgct gggtcacggctggctctcctgcggcctgattcctcgcaggggaaggtcattaccgtcctg tctcacgacatcttcggtatcatccggtccctggcggcctttcgccttgcgggcagcaac aaggactacttgattctggcaaccgactctggtcggatcacaatcattgagtatctgccg aaagaaaaccggttcagcaagctgcatctggagactttcgggaagtctggcgtgcggaga gtcattcctggagaatatctcgcttgcgatcccaagggacgcgcgtgtctgattgcctct atcgaaaagaacaagctcgtctatgtgctcaatcgaaattctcaggcagagctcaccatc tcctcgcctctggaggcccacaagcctggcgtcttggtcatttctatggtggcactggac gttgggtacgccaatcccgtgtttgcggcactggagattgattacactgaggtagaccaa gattctacgggcgaggctttgcgcgacctagaaacccagctggtctattatgagcttgat ctcggcctcaatcacgtcgtgaggaagtggtcggagcctgtagactccacagcctcgctg ctattccaggtgcccggcggcaacgatggccccagcggcgtcctggtttgcggcgaggaa aacatcacctaccgccactccaatcaagaagccttccgagtgccaatcccccgtcgtcga ggcgcaacggaggacccgtcaaggaagcgcaccatcatctccggtgtcatgcacaagctc aagggaagcgcaggagccttcttctttctgttacagacggaagacggtgacatgttcaag gtcactattgatatggtggaggatgacgaaggcaacaccaccggcgaggtcagaaggctc aagatcaagtatttcgatacagttccgcctgcagcgagcctttgcatcctcaagagcggc ttcctctatgttgccagtcagtttggaaacttttctttctaccagttcgagaagcttggg gatgatgacgaggagctggagttcaccagcgacgactttcctgtcgatgcacaggcttcg tacgatcctgtctacttctatcccagaccactggagaacttggtactcgttgagagcatc ccgtccatgaaccctcttcttgactgtaagattgccaacctgacgggtgaagacgcaccc cagatctacactatctgcggcaacggtgctcgcagcaccttccggacgcttaagcacgga ctcgagattaatgagatcgtgtcctccgagcttcccggaatcccttctgctgtctggacg ctgaagctgaatcgaaacgaacaatacgacgcctacatcgttctctccttcaccaacgga actcttgtcctcagtataggagagacggtggaggaagtcagcgactccggattcctcacg agtgttcccacactggctgcccagctgcttggcgaggacggcttgattcaagtccatccc aagggtattagacatatccgcaatggacaggtcaatcagtgggatgcccctcagcatcga tctatcgtggccgcgaccaccaacgctcaccaagtcgcgattgctttgagctctggtgaa atcgtctactttgagatggacgatgatggttctcttgccgagtatgacgagaagaaggag atgtttggaacggttacatgcttgagcctgggcgaggtccctgaaggcagactgcgaagc tcattccttgccgttggttgtgacgactgcacagttcgcattctgagtctcgacccagag tctacactagagaacaagtcggtacaagcgctgaccgcggcacccacgtcccttgctatt atctccatggaagactcgtcctcaggcggctctacgctttacctccacattggcctctac tcgggcgtctacctgcggacggtcctggacgaggttactggcgaattaaccgacacacga cagaagttcttggggccgaagcaagtgaggttgttccaagtcacagtccagggacggacg tgtgttcttggtctcagctctcggccgtggctcggatatgctgatccgatcaccaagact ttcgttgtcactcctctcaactacgtcgacctggaatggggctggaatttcaccagcgag caatgcgaagaaggcattgtgggtatccagggccaaactctacggattttctccgtcgac cggcttggagatacgttgattcagagctccattcctctgacttataccccaaagaagatg gtgaaacatccggaccaacctcttttctatgtgatcgaggcggacaatcacacactctct ccggcgctctgcgcccagttgctcgcagacccagcgcgtgtcaatggcgacagcaaggtt cttccccccgaagagtttggccatcccagaggcaaccgacgctgggcctcatgcatcagc gttgtcgacccgctggccgaagatggccaggttctgcaaagaattgacctggaggaaaac gaggccgcagtcagtctggcaatcgtcacatttgccagtcaggagaacgaaaccttcctg gtcgttggaaccggtaaagatatggtcttgaaccctcgcagtttttctgacgcctttgtc catatctaccggttcgagcgcgatggcaggggtctagtattcattcacaagaccaaggtg gaggagcccccgatggccatgatacctttccaggggcgtgtgttggtcggtattggaaag atgcttcgcatttacgaccttggtatgcgacagctgctgcgaaagtcccaagctgaagtg gcgccgcagcagattgtctcactgaacgcgcagggcagccgtatcgttgttggcgacgtg cagcagggtataacatacgttgtcttcaagcagcaaacgaacaagctcatcccttttgtg gacgataccgttgccaggtggacaacatgctcgaccatggtggactatgagaccaccgct ggaggagacaagttcggcaacatcttcatcgtgcgcgctccgcaaaaggccagtgaggag gccgatgaagagccagcgggacttcatctgcttaacgcaagaagttaccttcacggaacc tctcatcgcctagacctgatgtgccacctgtacacccaggatattccaacgagcattacc aagaccagcctggtggttggaggccaggaagtcctgctgtggagcggactgatgggcacg attggcgttctgattccgtttgtcacccgagaggacgcagactttttccagagtctagag cagcacctgcgagccgaggacccccctctggcaggccgagaccacttgatgtatcgcagc tactatgcacccatgaagggcgtcatcgacggcgatctttgcgagcgctatgctctgctt ccgaatgacaagaagcaaatgattgcaggggagctggaccgctcagtccgggaaattgag cggaaaatatcggacatccgaactcggtctgccttttaa

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