Trichoderma reesei RUT C-30: M419DRAFT_97764
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Entry
M419DRAFT_97764 CDS
T06031
Name
(GenBank) ATP-dependent RNA helicase HAS1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
trr
Trichoderma reesei RUT C-30
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trr03041
]
M419DRAFT_97764
03009 Ribosome biogenesis [BR:
trr03009
]
M419DRAFT_97764
Enzymes [BR:
trr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M419DRAFT_97764
Spliceosome [BR:
trr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
M419DRAFT_97764
Ribosome biogenesis [BR:
trr03009
]
Eukaryotic type
90S particles
Helicases
M419DRAFT_97764
Pre-60S particles
M419DRAFT_97764
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ETS02817
JGI:
TrireRUTC30_1_97764
UniProt:
A0A024SF55
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MDAATLNNKRKRKQGDAAADGTKKSKKLKNPPPAEVEPEEEDEVEAEEDAEVEAEDEGSD
DNDNDNDNEDGQSEGGSDLEDQTATRNGDGDVIPTQSAPIVSTMADSQKFEDLKLSEKTM
KAIQEMGFTKMTNIQRSAIPPLLAGKDVLGAAKTGSGKTLAFLIPAIEILSSLRFKPRNG
TGVIVVSPTRELALQIFGVARELMKYHSQTYGIVIGGANRRAEVEKLTKGVNLLIATPGR
LLDHLLNTQFVFKNLKSLIIDEADRILEVGFEDEMRQIVKVLSNEDRQTMLFSATQTTKV
EDLARISLRPGPLYINVDQEQQHSTVDGLEQGYVLCEGDERFLLLFSFLRKMQAKKKKVI
VFFSSCNSVKYYAELLNYIDCPVLDLHGKQKQQKRTNTFFEFSNAPHGILICTDVAARGL
DIPAVDFIVQFDPPDNTRDYIHRVGRTARGANGKGRSLLFLQPNEVGFLSYLKAARVPVV
EFEFPRKKIINVQSQLEKLIGKNYYLQQSAKEAFKSYLHAYASHSLRSVYDVQKLDLAKI
AKSFGFPTPPRVDITLGASMGRDKVQGRRAYGSQPKQVGKYKRDKRN
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgccacactgaacaacaagcgcaagcggaagcagggcgatgccgctgccgac
ggaaccaaaaagtcaaagaagctcaagaatcctcccccggcagaggtcgagcccgaagag
gaggatgaagtagaggcggaagaggacgcagaagtcgaggccgaggatgagggaagcgac
gacaacgacaacgacaacgacaacgaggatggacagtcagagggcggatcagacctcgag
gaccagaccgcaaccagaaacggcgatggagatgtcatacccacccagtctgcgcccata
gtatcgacaatggcagactcgcagaagtttgaggacctcaagctgtccgagaagacgatg
aaggcgatccaggagatgggctttaccaagatgaccaacattcagcgcagtgccatcccc
cctctccttgccggcaaggacgtcctcggtgcggccaagacgggttccggaaagacgctc
gccttcttgatccccgcgatcgagatcctcagctccctgcgattcaagccgcgaaacggc
accggcgtcatcgtcgtgtccccgacccgagaactcgcgctccagatctttggcgttgcg
cgcgagctgatgaagtaccactcacagacctacggcattgtcattggcggagcgaaccga
agggcagaggttgagaagttgaccaagggtgtcaatttgttgattgcgactcccggccga
ttgctcgatcatctgttgaatacccagtttgttttcaagaacctcaagtcgctgatcatc
gacgaggcggaccgtattctggaagttggtttcgaggatgaaatgcggcagattgtcaag
gtcttgtccaacgaggaccgccagactatgctgttttccgcgacacaaacaaccaaagtt
gaggatctggcccgaatctccctgcgacccggcccgctatacatcaacgtcgaccaggag
cagcagcacagcaccgtcgacggcctggagcagggctacgtcctatgcgagggcgacgag
cgcttcctcctgctcttctccttcctgcggaaaatgcaggccaagaagaagaaggtgatt
gtcttcttcagcagctgcaacagcgtcaagtactacgccgagctgctcaactacattgac
tgcccggtgctggacctgcacggcaagcagaagcagcagaagcggaccaatacctttttc
gagtttagcaatgcgccgcacggcatcctgatctgtaccgatgtggcggctcgcggtttg
gatattcccgccgtcgacttcattgtccagtttgaccctccggacaacacccgcgactac
atccaccgcgtgggccgaactgcccgaggtgccaatggcaagggacgaagtctgctcttc
cttcagcccaacgaagtcggcttcctgtcctacctcaaggccgcccgcgtgcccgtcgtc
gagttcgagtttccgcgcaagaagattatcaacgtgcagtcccagctggagaagctcatc
ggcaagaactactacctgcagcagagcgccaaggaggccttcaagtcgtatctgcacgcc
tacgccagccacagcctgcgctccgtctacgacgtgcagaagctggacctggccaagatt
gcaaagagctttggcttccccacgccgccgcgggtggacattacgctgggcgcgagcatg
ggacgggacaaggtgcaggggaggagggcgtatggcagccagccgaagcaggttggcaag
tacaagcgggacaagcggaattga
DBGET
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