Trichoderma reesei RUT C-30: M419DRAFT_97827
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Entry
M419DRAFT_97827 CDS
T06031
Name
(GenBank) eukaryotic initiation factor 4A-12
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
trr
Trichoderma reesei RUT C-30
Pathway
trr03013
Nucleocytoplasmic transport
trr03015
mRNA surveillance pathway
trr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
M419DRAFT_97827
09122 Translation
03013 Nucleocytoplasmic transport
M419DRAFT_97827
03015 mRNA surveillance pathway
M419DRAFT_97827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trr03019
]
M419DRAFT_97827
03041 Spliceosome [BR:
trr03041
]
M419DRAFT_97827
03009 Ribosome biogenesis [BR:
trr03009
]
M419DRAFT_97827
03012 Translation factors [BR:
trr03012
]
M419DRAFT_97827
Enzymes [BR:
trr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
M419DRAFT_97827
Messenger RNA biogenesis [BR:
trr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
M419DRAFT_97827
mRNA cycle factors
Stress granule specific factors
M419DRAFT_97827
Spliceosome [BR:
trr03041
]
Complex C
Other components
EJC/TREX
M419DRAFT_97827
Ribosome biogenesis [BR:
trr03009
]
Eukaryotic type
90S particles
Helicases
M419DRAFT_97827
Translation factors [BR:
trr03012
]
Eukaryotic type
Initiation factors
eIF-4
M419DRAFT_97827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
TniB
COG4_N
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ETS02870
JGI:
TrireRUTC30_1_97827
UniProt:
A0A024SC30
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MAEGAGGIDRKADERMEFSTSKEVTVHPTFESMSLKENLLRGIYAYGYESPSAVQSRAIV
QICKGRDTIAQAQSGTGKTATFSISMLQVIDTAVRETQALVLSPTRELATQIQSVVMALG
DYMNVQCHACIGGTNVGEDIRKLDYGQHIVSGTPGRVADMIRRRHLRTRHIKMLILDEAD
ELLNKGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVRILVKRDELTLEG
LKQYFIAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGD
MPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGR
FGRKGVAINFVTTEDVRILRDIELYYSTQIDEMPMNVADLIS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaggcgctggaggcattgaccgcaaggcggacgagaggatggagttttccacc
tccaaagaggtgacggtacacccaactttcgagagcatgtcgctgaaagagaacctcttg
cgcggcatctacgcttacggctacgaatcgccatctgccgtccagtcgcgagccatcgtc
cagatctgcaagggacgcgacaccatcgcacaggcccagtccggcacgggaaagacggcc
accttctcgatcagcatgctgcaggttatcgacacagccgtgcgcgagacgcaagccctc
gtcctgtcgcccacgcgagagctggcgacccagatccagtcggtcgtcatggccctgggc
gactacatgaacgtgcagtgccacgcgtgcatcggaggcaccaacgtcggggaggacatt
cgcaagctggactacggccaacacattgtttcgggcacgcccgggcgggtggctgacatg
attcgacgacgccatcttagaacgaggcacatcaagatgctcatcctggacgaggccgac
gagctcctgaacaagggattccgagagcagatctacgatgtataccgctacctgccgccg
gctacccaagtcgtggtcgtcagtgccactcttccctacgatgtgctcgacatgacgacc
aagttcatgaccgatcccgttcgaattctggtcaagcgagacgagctcacgctggaaggc
ttgaagcagtactttatcgccgtggaaaaggaagactggaagtttgacactctgtgcgac
ctctacgacaccctcaccattacgcaagccgtcatcttctgcaacacgcgccgcaaggtc
gactggctgacggacaagatgcgcgaggcaaacttcaccgtcagctccatgcacggcgac
atgcctcagaaggagcgcgacagcatcatgcaggactttagacagggaaacagccgggtt
ctcatctcgaccgacgtctgggctcgcggtatcgacgtgcagcaggtcagtctagttatc
aactacgacttgcccagcaaccgagaaaactacatccaccgcatcggccgtagtggacgc
ttcggccgcaagggcgtggccatcaactttgtgacgaccgaggacgtccgcatcctccga
gacattgagttgtactactcgactcaaattgacgagatgccgatgaacgtggcggatctc
atctcgtaa
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integrated database retrieval system
