Terriglobus roseus: Terro_0746
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Entry
Terro_0746 CDS
T02140
Name
(GenBank) putative HD superfamily hydrolase
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
trs
Terriglobus roseus
Brite
KEGG Orthology (KO) [BR:
trs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trs03019
]
Terro_0746
Messenger RNA biogenesis [BR:
trs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Terro_0746
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
RMI2
Cas3_HD
EIF3CL_C
Motif
Other DBs
NCBI-ProteinID:
AFL87081
UniProt:
I3ZCW3
LinkDB
All DBs
Position
complement(841543..842529)
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AA seq
328 aa
AA seq
DB search
MKDFYIADAAQHENAVVTSYFLLSQISARDKKGGGGQYLALTLADKTGTFEARMWEDFGK
ALTSCSQGCYVKAMGRIDKYQGRFQITLQQMRSAAETEIDVADFQPATQYDIDALWAELN
GFVDGFTNTHLQKLVRSFLDDPELGPAFRSAPAAKMLHHAWIGGLLEHVVFLLRLCGRVA
PQYVDEVDPDLLMTAAILHDFGKVRELAWKTSFSYTTEGQLLGHITIVIGMLRDRMATMP
EFPERLRILVEHLILSHHGRFEYGSPKLPMTPEAVVFSALDDLEAKMQNMRAEFAKAVES
GKRPDDVTEFSRSMDRALLNSKAYLAGV
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacttctatattgccgatgcggcgcagcatgagaatgccgttgtcacgtcttac
ttcctgctctcccagatctccgcgcgtgacaagaagggcggcggtggacagtacctggcg
ctgacgctggcggacaagaccggcacgtttgaggcgcgcatgtgggaggacttcggcaag
gcgctgacgtcgtgctcgcagggctgctatgtcaaggcgatgggtcgcatcgacaagtac
cagggacgtttccagatcacgctgcagcagatgcgatcggctgctgagaccgagatcgat
gtggctgacttccagcctgcgacgcagtatgacatcgacgcactctgggctgagctgaac
gggttcgtcgatggctttacgaacactcatctgcagaagctggtgcgcagctttctggat
gatccggagctcggtccggcgttccggtcggctcctgcggccaagatgctgcatcatgcg
tggatcggtggtcttctggagcatgtggtgtttctgctgcggttgtgcggtcgtgttgct
ccgcagtacgtggacgaggtcgatcccgacctgctgatgacggctgcgatcctgcacgac
ttcggcaaggtccgcgagctggcgtggaagacttcgttcagttacacgacggaaggccag
ttgctgggccacatcaccatcgtgatcggcatgctgcgggatcgcatggctacgatgccg
gagttcccggagcgacttcgcatcctggtggagcacctgatcctgtcgcatcacggccgg
ttcgagtacggatcgccgaagctgccgatgacgccagaggcggtcgtcttcagcgctctg
gatgatcttgaggcgaagatgcagaacatgcgggccgagttcgcgaaggcggttgagtcc
gggaaacgcccggatgatgtcaccgaattttctcgttcgatggatcgggcgttgttgaac
tccaaggcttatctggcaggggtgtga
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