Terriglobus roseus: Terro_0841
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Entry
Terro_0841 CDS
T02140
Name
(GenBank) DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
trs
Terriglobus roseus
Pathway
trs03420
Nucleotide excision repair
trs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
trs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Terro_0841
03430 Mismatch repair
Terro_0841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trs03400
]
Terro_0841
Enzymes [BR:
trs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Terro_0841
DNA repair and recombination proteins [BR:
trs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Terro_0841
MMR (mismatch excision repair)
Other MMR factors
Terro_0841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AFL87168
UniProt:
I3ZD50
LinkDB
All DBs
Position
complement(948186..951044)
Genome browser
AA seq
952 aa
AA seq
DB search
MSRLLDNMNPQQREGVLSVDGPVLLLAGAGSGKTRVITHRIAYLIEERGVAPDSILAVTF
TNKAAKEMGERVDHLIGHSSLARPLISTFHSLCVRVLRRDIEALRVNGVGLTKSFAIYDE
TDQQAIVKTALKRLGFDDKQLKPRVALGRISWAKNHMIDPQEYFLASTNPLEERIAHIFK
IYRDELAKNNAMDFDDLLLETVRLLKTSKETREKYQKRYRYLLIDEYQDTNRPQYELMRL
LSGEHGNVCVVGDEDQSIYSWRGADIKNILDFEKDFSDTKIIRLEQNYRSTQVILEGAGS
VVRNNTQRKGKELFTTREGGSLIGFYEAPDGENEALFVADRIQTYIREVTSAGETPKCAV
LYRTNAQSRLVEESLRRYNIQYHMVGGFSFYDRAEVKDMLSYLKLVQNPHDSIALNRVVN
SPPRGIGKTTMETLERIALTTGMSSWDAIERVAAEQLLPARAITALTGFRRLILDARAML
GPGFGDALAADAGLTTEEPTAEFVGEEENASASDANEDTSFDTSFNFGFDFGPSEERSTI
APENSQIEDADTSFDFSFEPTTPAAPEEAPQPSVAFNPFEASNNAAQKRSSSDKFAELRA
MAAPVVDSTAPLATSARIDGFRAPGDPATLPELIKFLNDRSGYLKILEAEGTPEAFSRME
NLKELANAAQDAQERGETLSDFLDHAALVSDADGINMDARVTLMTLHAAKGLEFPLVFLC
GMEEGLFPSSRTMQDPAGLEEERRLCYVGMTRAMDTLVMTRARYRRRYGSDMPDATVASR
FLEEVPSRLVEDLGSPADRPSFRADTGYGGYGGAYGKKWPRKGGDDFGGERHYSYEDEDQ
SGAAPPPKPKSNFGLQFGASKKAVATGAKPDSIDNIASFFGGGGKFSRPKMDIPEANGAT
QLARGSRVRHPKYGDGVVAQREGDGPDAKLTVQFTKHGVKKLVEKFAQLEKL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
gtgtcccgcctgcttgacaatatgaatccgcagcagcgcgaaggcgtgctgagtgttgac
ggccccgtgctgttgcttgccggtgccggcagcggcaaaacgcgcgtcatcacccaccgc
atcgcgtacctcatcgaagagcgcggcgtcgcccccgacagcatcctcgccgtcaccttt
accaacaaggcagcgaaggagatgggcgagcgcgtcgatcacctcatcggtcacagctcg
ctcgcccgcccgctcatcagcaccttccactcgctctgcgtgcgcgtcctccgtcgcgac
atcgaagctctgcgcgtcaacggcgtcggcctcaccaaaagcttcgccatctacgacgag
accgatcagcaggccatcgtaaaaaccgcgctcaaacgcctcggcttcgatgacaaacag
ctcaagccccgcgtcgccttgggccgcatctcctgggcaaagaatcacatgatcgatccg
caggagtatttcctcgcatcgaccaatccgctcgaagagcgaatcgcccacatcttcaag
atctatcgcgacgaactggcgaagaacaacgccatggacttcgacgacctcctgctcgaa
acagtccgcctgctcaagaccagcaaggagacgcgcgaaaagtatcagaagcgctatcgc
tacctgctcatcgacgagtaccaggacaccaatcgcccacagtacgaactcatgcgtctc
ctcagcggcgagcacggcaacgtctgcgtcgtcggtgatgaagaccagtccatctacagc
tggcgcggcgcggacatcaagaacatcctcgacttcgagaaagacttcagcgacacaaag
atcatccgcctcgagcaaaactaccgctcaacccaggtcatcctcgaaggcgcaggctcg
gtcgtccgcaacaatacgcagcgcaagggcaaagagcttttcaccacgcgcgaaggcgga
tcgctcatcggcttctacgaagcgcccgacggcgagaacgaagcgctcttcgtcgcagac
cgtatccagacctacatccgcgaagtcacctccgccggcgagacgccaaagtgcgcagtc
ctctaccgcaccaacgcgcagtcacgactcgtagaagagtcgctgcgccgctacaacatc
cagtaccacatggtcggtggcttcagcttctatgaccgcgctgaagtcaaggacatgctc
agctacctcaagctggtgcagaacccgcatgactccatcgcgctcaaccgcgtcgtcaac
tcgccaccacgcggcatcggcaaaacgacgatggaaaccctcgaacgcatcgcgctgacc
accggcatgagttcctgggacgccatcgaacgcgtcgcagcagagcagctgctgcccgcc
cgcgccatcacggcgctcaccggcttccgccgcctcatcctcgacgcacgcgccatgctc
ggccccggcttcggcgacgccctggcagcagacgccggactcaccacagaggagcccacc
gctgagttcgtcggtgaagaagaaaacgcctccgccagcgatgcgaacgaggacacttcc
ttcgacaccagcttcaacttcggcttcgacttcggccccagcgaagaacgcagcaccatc
gcgcccgaaaactcgcagatcgaagacgcggacaccagcttcgacttcagctttgagccg
accactccagccgcacccgaggaagccccgcagccctcggtcgccttcaatcccttcgaa
gccagcaacaacgccgcgcagaagcgatcgtcctcggacaagttcgccgagcttcgggcg
atggccgcgccggtcgtcgacagcaccgcaccgctcgcgaccagcgcccgcatcgacggc
ttccgcgccccgggcgatcccgctaccctgccggagctgatcaagttcctgaacgatcgc
agcggctacctcaagatcctcgaggccgagggcacgcccgaagccttcagccgcatggaa
aacctcaaagaactcgccaacgccgcgcaggatgcgcaggagcgtggcgagacactctcg
gacttcctcgatcacgctgccctcgtcagcgacgccgacggcatcaacatggacgcccgc
gtgaccctcatgacgctacacgccgccaagggcctcgagttcccgctggtcttcctctgc
ggcatggaggaaggcctcttccccagctcgcgcaccatgcaggaccccgccggcctcgaa
gaagaacgccgcctctgctacgtcggcatgacgcgcgccatggacaccctcgtgatgacg
cgggcccgctatcgccgccgctacggatccgacatgcccgacgccaccgtcgcatcacgc
ttcctcgaagaggttccctcccgcctcgtggaagacctcggctcccccgctgaccggccc
agcttccgcgcagacaccggctacggtggctacggcggcgcctacggcaaaaaatggccc
aggaagggcggtgacgacttcggcggcgagcgtcactacagctacgaggacgaagatcag
agcggcgccgcgccgccacccaagcccaaaagcaactttggcttgcagtttggcgcatcc
aagaaggctgtggctacaggggcaaaaccggacagtatcgacaatatcgccagcttcttc
ggcggtggtggcaagttttcgcggccaaagatggacattccagaggccaacggagccacc
cagctcgcccgcggcagtcgcgttcgccacccgaaatatggcgatggagtcgtcgcacag
cgcgaaggggacggtccggacgccaagcttacagtacaatttacaaagcacggcgtgaag
aagctggtagagaagttcgcccagcttgaaaagctctga
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