Terriglobus roseus: Terro_1012
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Entry
Terro_1012 CDS
T02140
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
trs
Terriglobus roseus
Brite
KEGG Orthology (KO) [BR:
trs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trs03009
]
Terro_1012
Enzymes [BR:
trs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Terro_1012
Ribosome biogenesis [BR:
trs03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Terro_1012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AFL87333
UniProt:
I3ZDL5
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All DBs
Position
complement(1141779..1142990)
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AA seq
403 aa
AA seq
DB search
MKPTHSSPESILATITDAITERVEPLCRHFGECGGCQLQHLPQPSQLAAKRATLIDVLRR
AGITTLPEIQAHAAEPWHYRNRIRMRVQGPDIGYSRRASNDFLPIAECPIASPLLLQMAM
TARDLVRSGATRWPAETSTIELFCDANQTSVQLSLQLDATVNTVDRDAPRDLRSLCETLQ
AEHPQLVGAGLSVAGAPQASQTRRVQESVRVEIARWGSQQLTYPVDGRDYNITRNAFFQV
NRFLTSAMVELVLGDRGGTLALDLFAGAGLFSVPLTERFDQVIAVEIGEPAATDLAAHLS
ACGPQHSARRSTTLDFLQKQASRLAQTPDLVVLDPPRAGLGAPTVNALSRTGAREIVYVS
CDAGTFARDARSLIESGYTLTTLHLLDLFPQTFHTETIAVFRR
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccacacacagctcgcccgagagcatcctcgccaccatcaccgatgccatcacc
gagcgcgtagagccgctctgccgtcacttcggcgagtgcggcggctgccagttgcaacat
ctgccgcagccatcgcaactcgccgccaagagggcaacgctcatcgacgttcttcggcga
gcaggcatcaccactcttcctgaaatccaggcccacgctgcggaaccatggcactatcgc
aaccgcattcgcatgcgcgtgcagggtccagacatcggctacagccgccgcgccagcaac
gacttcctgcccatcgcagagtgccccatcgcatcgccattgcttttgcagatggccatg
accgctcgcgatctcgtgcgtagtggcgcaacacgctggcctgcagagaccagcaccatc
gaactcttctgcgacgccaatcaaacaagcgtgcagctctcactccagctcgatgcaacg
gtgaacaccgtcgatcgcgacgcaccgcgtgaccttcgttccctctgcgaaactctgcag
gcagagcatccgcaactcgtcggtgccggtctctccgtggccggcgcaccgcaggcctcg
cagacacgtcgcgtgcaggagagcgtccgcgtcgagatcgcccgctggggctcacagcaa
cttacctatcccgtagacggtcgcgactataacatcacgcgcaacgccttctttcaggtc
aaccgcttcctgacatccgccatggtcgagctcgtgctcggcgatcgcggcggcacgctc
gccctcgatctcttcgcaggcgcaggcctcttctcagtgccgctgaccgaacgatttgat
caggtcatcgcagtcgaaatcggcgaacctgcagcgaccgatcttgcagcacatctgagc
gcatgcggcccgcaacacagcgcccgccgcagcaccacactcgacttcctgcagaagcaa
gcctcacgcctcgcgcaaacgcctgacctggtcgtactcgacccgccacgcgccggcctc
ggcgcgcccaccgtcaacgctctctcacgcaccggcgcacgcgaaatcgtctacgtctcc
tgcgacgcaggaaccttcgcgcgcgacgcaaggtcgctgatagaatccggctacacactg
acaacactgcatctgctggacctttttccccagaccttccacactgagaccatcgcggtc
ttccgtcgctga
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