Terriglobus roseus: Terro_1859
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Entry
Terro_1859 CDS
T02140
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
trs
Terriglobus roseus
Pathway
trs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
trs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Terro_1859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trs03019
]
Terro_1859
03016 Transfer RNA biogenesis [BR:
trs03016
]
Terro_1859
Enzymes [BR:
trs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Terro_1859
Messenger RNA biogenesis [BR:
trs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Terro_1859
Transfer RNA biogenesis [BR:
trs03016
]
Prokaryotic type
tRNA degradation factors
Terro_1859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
OB_RRP5_4th
EMA
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
AFL88151
UniProt:
I3ZFY3
LinkDB
All DBs
Position
2193053..2195497
Genome browser
AA seq
814 aa
AA seq
DB search
MKQEVSVELAGGKRITFETGRIAKQASGAAFTSCGDTVILATAVGAPEPKEGVDFFPLTV
EYRETTYAGGRIPGGFIKREGRPSEKEILTCRQIDRPIRPLFPETYRNETQVVAFVYSAD
KENDPDVVAINAASCAIALSDLPFEGPIGAVRIGQIDGAFIVNPTYAERAKSTLNIMVAG
TKDGIVMVESGAKGVSEETVVEAIEFGHTQAKLICAAIMELVGLAGKPKRATKALEVDTA
YAESIKIQVGDRLIDAVDTQKYDKIASYAKIKELKDELKKSLPEGSDAAASKKLGKYYDK
LREEIFREQVLKDRIRPDRRAFNKVRDIEIEVGILPRPHGSALFQRGETQAIVTATLGTG
DDAQRMESYEGEQKKRFMLHYNFPPYSVGEVGRMSGTGRREIGHGALAYRAIEAVLPEDS
PYTLRVVSDITESNGSSSMASVCGASLALMHAGIPLKAAVAGIAMGLVKEGDEYAILTDI
AGAEDHYGDMDFKVAGTREGITALQMDIKIMGITPQIMREALAQAKEARLFLLDKMDAVI
SGAREEKSRYAPQIKTLQIPTDKIRDLIGPGGKVIRSIIEATQVKIDVDDTGKVDVSSSD
PDGLARALQMITDITAVPEIGKTYLGKVVRLAEFGAFVEIFPGTDGLLHVSEIAEHRVKE
VKDELREGDTVLVKVLGIEGNRIKLSRKAVLKEQRAKLGLPDPEPQADDRGGDRPAGGGD
RDRGPRPPRPERTAPAPSEETITLEGGDDFEDDDDMDDEEGDEEGDEPETTTEGGAAPAG
GAPRPAGGAKRRRRRGGRRGPGAGGPAAGGAPSA
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggaagtttccgttgaacttgccggtggcaagcgcattacattcgagaccggc
cgcattgcaaagcaggcctcaggcgcggcgttcacaagctgcggcgacaccgtcatcctg
gctacggccgttggcgcacccgagccgaaagaaggcgtcgactttttcccgctgaccgtt
gagtaccgcgaaaccacgtacgccggtggccgcatccccggtggcttcatcaagcgcgaa
ggccgccccagcgagaaggaaattctcacctgccgccagattgatcgcccgatccgcccg
ctgttcccggagacctaccgcaacgagacccaggtggtcgcgttcgtgtactccgctgat
aaggaaaacgatccggatgtggtcgcgattaacgcagcatcctgcgcgattgccctctct
gatctgcccttcgaaggccccatcggcgctgtccgtattggccagatcgacggcgccttc
atcgtgaacccgacctacgctgagcgcgcgaagagcacgctcaacatcatggttgccggc
accaaggacggcattgtgatggtcgagtctggcgccaagggcgtcagtgaagagacggtc
gtcgaagccatcgagttcgggcacacgcaggccaagctgatctgcgcagccatcatggag
ctggttggccttgccggcaagcccaagcgcgctaccaaggcgcttgaagtggacactgcc
tatgccgaaagcatcaagatccaggttggcgaccgcctgatcgatgccgtcgacacgcag
aagtacgacaagattgcgagctacgccaagatcaaggaattgaaggatgagctgaagaag
tctcttccagagggcagcgatgctgccgcttcgaagaagctcggcaagtactatgacaag
ctccgcgaagagatcttccgtgagcaggttctaaaggatcgcatccgtcccgatcgccgc
gccttcaacaaggttcgcgacatcgagattgaagttggcatcctgcctcgcccgcacggc
tcggcactcttccagcgcggtgagacccaggccattgtgaccgcaactctgggcactggc
gacgatgcgcagcgcatggagtcgtacgagggtgagcagaagaagcgcttcatgcttcac
tacaacttcccgccgtattccgttggtgaggttggacgtatgagcggcacgggtcgccgc
gagattggccacggcgcgcttgcgtaccgcgcgatcgaggctgtgcttcccgaggattcg
ccctacactctgcgcgtggtttccgatatcaccgagtcgaacggatcgtcgtcgatggcg
tctgtttgcggcgcttcgctggcgctgatgcatgccggtatcccgctgaaggcggcggtt
gccggtattgcgatgggcctggttaaggaaggcgacgagtacgccatcctgaccgacatt
gccggtgcggaagatcactacggcgacatggacttcaaggtggccggtacgcgcgaaggc
attaccgcgctgcagatggacatcaagatcatgggcatcacgccgcagatcatgcgtgag
gctctggcgcaggccaaggaagctcgcctgttcctgctggacaagatggacgctgtgatc
agcggtgcgcgtgaagagaagtcacgctacgctccgcagatcaagacgctgcagattccg
acggacaagattcgtgacctgattggacccggcggcaaggtgattcgttcgatcatcgag
gcgacccaggtgaagatcgatgtggacgacaccggcaaggtggacgtttcgtcgagcgat
ccggacggcctggcacgcgcactgcagatgatcaccgatatcacggctgttcccgagatc
ggcaagacgtacctgggcaaggtggttcgcctggcagagttcggcgcattcgtcgaaatc
ttcccgggcacggacggcctgctgcacgtttccgagattgcagaacatcgcgtgaaggaa
gtgaaggacgaactgcgcgagggcgatacggttctggtgaaggtgctcggtatcgagggc
aaccgcatcaagctgagccgcaaggcagttctgaaggagcagcgcgccaagcttggcctg
cctgatcccgagccgcaggcggacgatcgcggtggcgatcgcccggcgggtgggggcgac
cgtgatcgcggtccccgtcctccgcgtcctgagcgcactgctccggcaccgtccgaagaa
accatcacgcttgagggcggcgatgacttcgaagacgacgatgacatggatgacgaagag
ggcgacgaggagggcgatgagcccgagacgacgaccgagggtggcgcggctccagctggt
ggcgctccgcgtcctgctggcggtgcaaagcgtcgccgccgtcgcggtggacgccgtgga
ccgggtgcaggtggcccggcggccggtggcgcaccaagcgcgtaa
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