Terriglobus roseus: Terro_1900
Help
Entry
Terro_1900 CDS
T02140
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
trs
Terriglobus roseus
Pathway
trs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Terro_1900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trs03400
]
Terro_1900
DNA repair and recombination proteins [BR:
trs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Terro_1900
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Terro_1900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
UvrA_inter
AAA_16
AAA_21
AAA_29
nSTAND1
AAA_22
AAA_33
AAA_23
Viral_helicase1
RsgA_GTPase
AAA_25
DnaJ_CXXCXGXG
APS_kinase
cobW
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AFL88190
UniProt:
I3ZG22
LinkDB
All DBs
Position
complement(2234531..2237560)
Genome browser
AA seq
1009 aa
AA seq
DB search
MAREKKAVALPEVIPPPATPALKAVSPNENIVIRGARTHNLKGIDVDIPHNMLTVVSGVS
GSGKSSLAFDTVYAEGQRRYVESLSAYARQFLERIEKPDVDHMDGLAPAIAIKQKNQTRN
PRSTVATATEIYDYMRLLYARCGTVTCLHCGGIVKRDTVDEIATSILALGDDTRLFALFP
IERRPIVLEPMQDFALPVEESPAKPAPKPKKLSTKKTKEVEAPPVNDPTEPMRDRLVELR
RRGYNRLFQNGSIVEFSTPESLLELNFAEPIYVLADRLSVSAEVRARIVDAIETGYRESG
EIVFLTAPRDGSEPQRIRFSSAFECTNCHRAYRDPEPRLFSFNNPFGACPRCQGFGNTID
FDPDLIIPDKGKSLDDGAIDPWTKPKYREFHGMMKRFATANSIPTKLAWYDMTPAQQNAI
WDGGSGFVGIRGFFRSLDSKKYKLHVRVFLSKYRGYAPCPDCRGQRLRAEARAVLLNDRN
ICEAAALTITGARIFFEGLQLSPAQAEIAGKILEEVRQRIGFLEQVGLEYLTLDRLSSTL
SGGESQRIQLASSLGSRLVGALYVLDEPSIGLHSRDTAKLIKIMHELRDLGNTVLVVEHD
PDVILAADRLIDLGPGAGELGGQLLAIGTVEHVKNDPNSITGKYLSGRTRIPVPQERREP
TREVLKLKGARIHNLRGVDLEIPLGMLTVVTGVSGSGKSTIVHQVLHRALQHALGVEGAS
GDVTQLYRELIGTHFLREVVLVDQSPIGRTPRSNPVTYIKAFDAIRELFASQPDSRRKNY
TAGSFSFNVPGGRCDTCEGDGTVTVEMQFLADIELPCEECGGSRYKPGILEVKYKNKNIH
DVLNMTVKDAVHYFAGTPKIVERLQVLDEVGLGYVRLGQSATTLSGGEAQRVKLASHLAN
IRTGTRGGETKKAASRVLYILDEPTTGLHFADVATLLQAFRKLIEGGGSLLVIEHNMDII
KCADWVIDMGPEGGSAGGQVVAVGTPEEIAKVPGSYTGQWLAPVLEAAL
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
ttggcgcgtgagaagaaagccgttgcactgccggaagtcatcccccctccggcaacgccc
gcgctgaaggcggtctcgcccaacgagaacatcgtcattcgcggtgcgcgtacccataac
ctcaagggcatcgacgtcgacatcccgcacaacatgctgacggtcgtcagcggtgtgtcg
ggctcgggcaagtcctcgctcgccttcgataccgtctacgccgaaggccagcgtcgctac
gtcgaatcgctctctgcctacgcgcggcaattcctcgagcgcatcgagaagcctgacgtc
gatcacatggacggcctcgcgcccgccatcgccatcaagcagaagaaccagacgcgcaac
ccccgctcgaccgtggccaccgcaaccgagatctacgactacatgcggctgctctacgcg
cgctgcggcaccgtcacctgcctgcactgtggcggcatcgtcaagcgcgacaccgtcgat
gagatcgccaccagcatcctcgccctcggcgacgacacgcgcctcttcgcactcttcccc
atcgagcgccgtcccatcgtcctcgagcccatgcaggacttcgccctgcccgtggaagag
tcgcccgccaagccggcacccaagccgaagaagctctcgaccaagaagacgaaggaagtc
gaagcacctcccgtcaacgatccaacggagcccatgcgcgaccgcctggtcgaactccgt
cgccgtggctacaaccgcctcttccagaacggcagcatcgttgagttctccacgccggaa
tcgctgctggaactcaacttcgccgaaccgatctacgttctcgccgaccgcctcagcgtc
agcgcggaagtccgtgcacgcatcgtcgacgccatcgagaccggctaccgcgagagcggc
gagatcgtcttcctcaccgcgccgcgcgatggctccgagccgcagcgcatccgcttctcc
tcggccttcgagtgcaccaactgccaccgcgcctaccgcgatccggagccacgtctcttc
agcttcaacaaccccttcggcgcctgcccgcgctgccagggcttcgggaacaccatcgac
tttgatccggacctcatcatcccggacaagggcaagtcgctcgacgacggcgcgatcgat
ccgtggaccaagcccaagtaccgcgagttccatggcatgatgaagcgcttcgccacggcg
aacagcatccccaccaagctcgcctggtacgacatgacgcccgcgcagcagaacgccatc
tgggatggcggctcaggcttcgtcggcatccgcggcttctttcgttcgctcgattccaag
aagtacaagctgcacgtccgcgtcttcctctccaagtaccgcggctacgcaccatgcccg
gactgccgcggccagcgcctccgcgcggaagctcgcgccgtcctgctcaacgacaggaac
atctgcgaagccgccgcactcaccatcaccggcgcacgcatcttctttgaaggtttgcag
ctctcgcccgcacaggcagagatcgccggcaagatcctcgaagaggtacgccagcgcatc
ggcttcctcgaacaggttggcctggaatacctcacactcgaccgcctctcctctaccctc
agtggcggcgaatcgcagcgtatccagctcgcctcatcactcggctcacgcctcgtcggt
gcgctctacgtgctcgacgagccatccatcggcctgcactcgcgcgataccgccaagctc
atcaagatcatgcatgagctgcgcgacctcgggaacaccgtcctcgtcgtcgagcacgat
cccgacgtcatcctcgcagccgatcgcctcatcgatctcggtcccggcgccggcgaactc
ggcggccagctcctcgccatcggcaccgtcgaacacgtcaagaacgatcccaactccatc
accggaaaatacctctccggtcgcacacgcatccccgtgccgcaggagcgccgcgaacct
actcgcgaagtcctcaaacttaaaggcgcacgcatccataacctgcgcggcgtggacctc
gaaataccgttaggcatgttaaccgtcgtcaccggcgtcagcggcagcggcaagagcacc
atcgtgcaccaggtgctgcaccgcgcgctgcaacacgcactcggcgtcgaaggtgccagc
ggcgatgtcacgcagctttatcgcgaactcatcggcacccacttcctccgtgaagtcgtc
ctcgtcgaccagtcccccatcggccgcacaccgcgttcgaaccccgtcacctacatcaag
gccttcgacgccatccgcgaactcttcgcatcgcagcccgactcgcgccgcaaaaactac
accgcaggcagcttcagcttcaacgtccccggcggccgctgcgatacctgcgaaggcgac
ggcaccgtcacggtcgagatgcagttcctcgccgacatcgaactgccctgcgaagaatgc
ggcggctcgcgctacaagcccggcatccttgaggtgaagtacaagaacaagaacatccac
gatgtcctgaacatgaccgtgaaggatgccgtgcactactttgccggcaccccgaagatc
gtggaacgcctccaggtcctcgacgaagtcggtctcggttacgtccgcctcggtcagtcg
gcaaccacgctcagcggcggcgaggcacagcgagtcaaactcgcctcgcacctcgccaac
atccgcaccggcacgcgcggcggcgagacgaagaaggccgccagccgcgtcctctacatc
ctcgacgagccaaccacgggcctacacttcgccgacgtcgcaacccttctgcaggccttc
cgcaaactcatcgaaggcggcggatcgctcctcgtcatcgaacacaacatggacatcatc
aagtgcgcggactgggtcatcgacatgggtccggaaggcggctcggccggcggccaggtc
gtcgccgtgggcacgccggaagagatcgcaaaggtccccggctcctacacgggccagtgg
ctcgctccggtacttgaggcagcgctatga
DBGET
integrated database retrieval system
