Terriglobus roseus: Terro_1949
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Entry
Terro_1949 CDS
T02140
Name
(GenBank) DNA-directed DNA polymerase III PolC
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
trs
Terriglobus roseus
Pathway
trs03030
DNA replication
trs03430
Mismatch repair
trs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
trs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Terro_1949
03430 Mismatch repair
Terro_1949
03440 Homologous recombination
Terro_1949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trs03032
]
Terro_1949
03400 DNA repair and recombination proteins [BR:
trs03400
]
Terro_1949
Enzymes [BR:
trs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Terro_1949
DNA replication proteins [BR:
trs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Terro_1949
DNA repair and recombination proteins [BR:
trs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Terro_1949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AFL88235
UniProt:
I3ZG67
LinkDB
All DBs
Position
complement(2290170..2293700)
Genome browser
AA seq
1176 aa
AA seq
DB search
MAVDFTHLHLHTDYSLLDGACDVDKLAAHMSKLGQKGAAMTDHGNIFGAVHFADAMQKKG
IKPIIGCELYLSQTDDHRERSGGYNHFLVLAENDAGYRNLVRLTSEAAVHGFYRKPRVSK
EFLSKHTEGLIAFSGCLAGEINQHLMKDKYEEAKRSAGMFQDMFGKGNFFLEIQDHGLEP
DKGVCDQLFRMEKDLDIPLIATNDSHYVAADDSRAHEILLCVQTAGSMNDPNRFKFDTQE
FYIKSAEEMHRTFAGHEEVCTRTMQFVDRCNVKLKKVDDPFPAFPVPEGMSLDDYFEAVC
REGLKKRLNTAVTHLRSRGLLRYEIDAYEARLQRELDCIKSMKFPGYFMIVWDFIRYAKE
QNIPVGPGRGSAAGSLVAYVMEITDVDPLQNELLFERFLNPERVSMPDIDIDFCMNRRGE
VIDYVKRKYGADQVAQIITFNTMAAKAAIKDVGRALEIPYGEIDRIAKMIPATIGITIAE
ALKDSPPLAAVYETNPQIREVIDTAMRLEGLVRGAGVHAAGVVIAPQPLTELVPVTLTKT
DDLVTAYDMKAVEKMGLLKMDFLGLTTLTVIDDCLKLIKQHQGVTIDMSTIDLDDQVTYE
KVFHRALTSGVFQFESGGMRDVLRRYKPTTVEDLTALNALYRPGPIQGGMIDDFIERKWG
RRAVEYMLPDLEGLLKETLGVIVYQEQVMQISSVIAGYSLGGADLLRRAMGKKDPAAMEV
QRELFMAGAAERKHPKDKAGALFDLILQFAGYGFNKSHSSAYALLAYHTAWLKTHYPVEF
MAALLTSETSKPENVVKYIGECREMGITVLPPDVQISDSNFTPSNGGIRFGLAAIKNVGG
NAIDTIVASRRKLQAEGKPGFSSMWDFCESVELRLLNKRVFESLIKAGAMDSFGPRARVY
NAVDKAMERAQKSQRDAASGQSGLFGLFDAGPAGGGQAAAEDELPQVPEWDEHTRLQNEK
EVLGFFVSGHPMDKYREKLRNIKGVLDTATACEMKPEPVVFQRGQREPQTEIQIAGVISA
LKVAKSKRSGEMYASAILEDTHGKIDIIAFPKDYEKLQEALKIDVPVLVSGSLRGEEDSA
PKLSVTKITALEDVKLRLPEALRIKVPLHNPDAALLDKLLSIFTAKPGPGKVLLDLEEPG
EFCAVLEPVGFNVCADRLFIDQVEGLVGAGGVKVIN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggccgttgatttcacgcacctgcatctccacaccgattacagccttctggacggcgcc
tgcgacgtcgataaactcgccgcgcacatgagcaagctgggccagaaaggcgcagccatg
accgaccatggcaacatcttcggcgcggtgcactttgcagacgccatgcagaagaagggc
atcaagcccatcatcggctgcgagctttacctgtcgcagaccgacgaccatcgcgaacgc
agcggcggttacaaccacttcctggtgctggcggagaacgacgccggctatcggaacctg
gtgcgtttgacgagtgaagcggcggtgcatggcttctatcgcaagccgcgcgtctcgaag
gagttcctgtcgaagcacacggaaggcctcatcgctttcagcggctgcctggcgggtgag
atcaaccagcacctgatgaaggacaagtacgaagaggcgaagcgtagtgcgggcatgttc
caggacatgttcggcaagggcaacttcttcctcgagattcaggatcacgggttggagccg
gacaagggtgtctgcgatcagctcttccggatggagaaagacctcgacattccgctgatc
gcgaccaacgattcgcactatgtcgctgcggatgacagccgcgcacacgagatcctgctc
tgcgtacagacggcgggttcgatgaacgacccgaaccgcttcaagttcgatacgcaggag
ttctacatcaagtccgcggaggagatgcaccgcaccttcgccggccacgaagaagtctgc
acacgcaccatgcagttcgtcgaccgctgcaacgtgaagttgaagaaggtagacgacccg
ttcccggcgttccccgtgcccgagggtatgtccctcgacgattactttgaagctgtctgc
cgtgaaggtctgaagaagcgactgaacaccgcggtaacgcacctgcggtcgcgtggtctg
ctgcgttacgagattgacgcgtatgaagcgcgtctgcagcgcgaactggattgcatcaag
agcatgaagttccccggctacttcatgatcgtgtgggacttcatccggtacgcgaaggag
cagaacatcccggttggacccggccgtggatcggctgcgggttcgctcgtcgcctacgtc
atggagattacggacgtcgacccgctgcagaacgagctgctcttcgagcgcttcctgaat
cctgagcgcgtgtcgatgcctgatatcgatatcgacttctgcatgaaccgccgcggcgag
gtcatcgactacgtcaagcgtaagtatggcgcagaccaggttgcgcaaatcatcaccttc
aacaccatggctgcaaaggccgccatcaaggacgtcggtcgcgccctcgaaatcccctat
ggcgaaatcgatcgcattgcgaagatgattcctgcgacgatcggcatcacgatcgcggag
gctttgaaggactcgccgccgctggccgcggtgtacgagacgaatccgcaaatccgcgaa
gtcatcgacactgccatgcgtctcgagggacttgtgcgtggcgctggcgttcatgctgcc
ggtgttgtgattgcgccgcagccgttgacggagctggtgcctgtcacgctgaccaagact
gatgatcttgttacggcgtatgacatgaaggccgtcgagaagatgggtctgctcaagatg
gacttccttgggctaaccacgctgaccgtcatcgacgattgcctcaagctcatcaagcag
caccagggcgtcaccatcgatatgtcgaccatcgatctggatgaccaggtgacgtatgag
aaggtcttccatcgtgcgctgacttcaggtgtcttccagtttgaatcgggcggcatgcgc
gacgttcttcgccggtacaagcccaccaccgtcgaagacctcacggcactcaacgcactc
tatcgcccgggcccaatccagggcggcatgattgatgacttcatcgaacgtaagtgggga
cgccgcgctgtcgaatacatgttgccggacctcgaaggcctgctgaaggagacgctcggc
gtcatcgtctaccaggaacaggtcatgcagatctccagcgtcattgctggatactcactc
ggcggtgctgatcttctgcgccgcgccatgggtaaaaaagatcccgctgccatggaagtg
cagcgtgagttgtttatggccggcgcagccgaacgcaagcaccccaaggacaaggccggc
gctctcttcgatctcatcctgcagtttgcgggttatggctttaacaagtcgcactcgtcc
gcatacgcgctcctcgcgtatcacacggcatggctcaagacgcactatcccgtcgagttc
atggcggcgctgctgaccagtgaaacctcgaagccagagaatgtcgtgaagtacatcggc
gagtgccgcgagatgggcatcaccgtgctgccgcccgacgtgcagatctctgactccaac
ttcacacccagcaacggcggcatccgcttcggcctcgctgccatcaagaacgttggcggc
aatgccatcgacacgatcgtcgcctctcggcgcaaactgcaggcagaagggaagccgggc
ttctcgtccatgtgggacttctgcgagtccgtcgagctgcgcctgctgaacaagcgcgtc
ttcgaatcgctcatcaaggccggagccatggacagcttcggaccacgcgcccgcgtctac
aacgcagtcgataaggccatggaacgcgcgcagaagtcacagcgcgacgccgccagcggc
cagagcggcctcttcggtctcttcgacgctggcccagccggcggtggacaggcagccgca
gaggacgagctgccccaggtgcccgagtgggacgagcacacgcgtcttcagaacgaaaag
gaagtcctcggcttcttcgtcagcggacaccccatggacaagtaccgcgagaagctccgc
aacatcaagggcgtcctcgacaccgcaaccgcctgcgagatgaagccggaaccggtggtc
tttcagcgcggccagcgcgaaccgcagaccgaaattcaaatcgccggcgtcatctccgcg
ctcaaggtcgcaaagagcaaacgcagcggcgaaatgtacgcctccgccatcctcgaagat
acccacggcaagatcgacatcattgcctttccgaaggactacgagaagctgcaggaagcg
ctcaagattgacgtaccggtactcgtaagtggttcgctgcgcggtgaagaagactccgca
ccaaagctctccgtcaccaagatcacagcactcgaagatgtgaagctgcgcctgcccgag
gccctacgcatcaaagtgccactgcacaatcccgacgccgctctgctcgacaagctgctc
agcatcttcacagccaagcccggcccaggcaaagtgctcctcgacctcgaagagcccgga
gagttctgtgctgtcctcgaacccgtcggcttcaacgtctgcgccgaccgtctcttcatc
gatcaggtggaaggtctcgtcggtgctggtggcgtcaaggtcatcaactaa
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